Bacillus amyloliquefaciens TA208: BAMTA208_09885 Help Entry BAMTA208_09885    CDS       T01824                                  Symbol rnjA Name (GenBank) ribonuclease J1   KO K12574   ribonuclease J [EC:3.1.-.-] Organism baz  Bacillus amyloliquefaciens TA208 Pathway baz03018   RNA degradation Brite KEGG Orthology (KO) [BR:baz00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     BAMTA208_09885 (rnjA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:baz03019]     BAMTA208_09885 (rnjA) Messenger RNA biogenesis [BR:baz03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      BAMTA208_09885 (rnjA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF5548 DUF4453 Motif Other DBs NCBI-ProteinID:  AEB24144 LinkDB All DBs Position 1952401..1954068 Genome browser AA seq 555 aa AA seqDB search MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN IIGEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK MAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ VIEAAVLNGRKVAVFGRSMESAIEIGQTLGYISCPKNTFIEHNEINRMPANKVTILCTGS QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGSL NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE VLALKGEEAAVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMDDFKV SAGPDLISRGFVYMRESGDLINDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPFLYE KTKRRPMILPIIMEV NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgaaatttgtaaaaaatgaccagactgccgttttcgccctcggcggattgggcgagatc gggaaaaatacgtatggggtgcagtttcaggatgaaattgtactgattgatgcgggaatc aagtttcctgaagatgaacttctcggcattgattacgtaatccctgattacacgtattta gtaaaaaacgaagataaaattaaaggtctgtttatcacccacggtcacgaagaccatatc ggcggtattccgtacctgctcagacaagtaaatattcccgtttacggcggtaaactcgcg atcggcttacttcggaataaacttgaagagcacgggctgttaagacagaccaaattaaac atcatcggtgaagatgacatcgttaagttccggaagacgtctgtatccttcttcagaacg acacacagcattccggattcatacggaatcgtcgtcaaaacaccgccaggcaatatcgta cataccggggactttaagttcgactttacaccggtaggcgaaccggcaaacctgacaaag atggccgaaatcgggaaagaaggcgtcttgtgcctgctttctgacagtacaaacagtgag gtgcccgatttcaccatgtcagaacgccgcgtaggcgaaagcattcacgatattttccga aaagtggacggcagaattatatttgcgacatttgcttcgaacatacaccggcttcagcag gtgattgaagcagccgttttaaacggcagaaaagttgccgtattcggacgcagcatggaa tcggctattgaaatcggacaaactctcgggtacatcagctgtcctaaaaatacgtttatt gagcataacgaaatcaatcgtatgcctgccaataaagtaacgattttatgtacgggaagc cagggtgaaccgatggcggcgttatcacgcatcgctaacggcacgcaccgtcagatatcc attaaccccggagatacggtcgtcttttcttcctctccgattcccggaaacacaatcagc gtaagccgcaccatcaaccagttataccgtgcgggcgctgaagtcattcacggttcattg aatgacattcatacatccggacacggcggacaggaagaacagaaattaatgctccgcctg atcaaaccgaagttcttcatgccgattcacggggagtacagaatgcagaaaatgcacgtc aaactcgcgactgattgcggcatacctgaagaaaactgcttcatcatggacaatggcgaa gtgctcgcgctcaaaggagaagaagccgctgttgcaggcaaaattccgtccggctccgtt tacattgacggaagcggaatcggtgatatcggcaatatcgtgctccgcgaccgccgcatt ctttcagaagaaggccttgttatcgttgttgtcagcatcaatatggatgactttaaggta tcagcaggacctgatttaatttcaagaggttttgtatacatgagagaatccggtgattta atcaacgacgcgcagcagctcatttcgaaccatctggagaaagtaatggatcggaaaaca acgcagtggtccgaaattaaaaacgaaatcaccgacacgcttgctccgttcctatacgaa aaaacaaaacgccgcccgatgatccttccgatcattatggaggtctaa

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