Bacillus amyloliquefaciens TA208: BAMTA208_12650
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Entry
BAMTA208_12650 CDS
T01824
Symbol
sinR
Name
(GenBank) transcriptional regulator SinR
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baz03000
]
BAMTA208_12650 (sinR)
Transcription factors [BR:
baz03000
]
Prokaryotic type
Helix-turn-helix
XRE family
BAMTA208_12650 (sinR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
HTH_37
KorB
Sigma70_r4
HTH_10
GH-E
Phage_CI_repr
CdhC
DUF6364
Motif
Other DBs
NCBI-ProteinID:
AEB24693
LinkDB
All DBs
Position
2420598..2420933
Genome browser
AA seq
111 aa
AA seq
DB search
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHT
LLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREFLEYQKWRKAQKEE
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
ttgattggccagcgtattaaacaataccgaaaagaaaaaggctactcactatcagaacta
gctgaaaaagctggggtagcgaagtcttatttaagctcaatagaacgaaatttacagacg
aacccctccattcaatttctagaaaaagtctccgctgttctggacgtctcggttcataca
ttacttgatgaaaaacatgaaaccgaatacgatggtcaattagatagtgaatgggagaaa
ttagttcgcgatgcgatgacatccggggtatcaaaaaaacaatttcgtgaatttttagaa
tatcaaaaatggagaaaagcgcaaaaagaggagtag
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