Bacillus amyloliquefaciens TA208: BAMTA208_13125
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Entry
BAMTA208_13125 CDS
T01824
Symbol
comEB
Name
(GenBank) enzyme associated to DNA transport (competence)
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
baz
Bacillus amyloliquefaciens TA208
Pathway
baz00240
Pyrimidine metabolism
baz01100
Metabolic pathways
baz01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BAMTA208_13125 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
baz02044
]
BAMTA208_13125 (comEB)
Enzymes [BR:
baz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
BAMTA208_13125 (comEB)
Secretion system [BR:
baz02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
BAMTA208_13125 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
SNAD4
iHKD
APOBEC2
NAD1
Motif
Other DBs
NCBI-ProteinID:
AEB24786
LinkDB
All DBs
Position
complement(2502662..2503231)
Genome browser
AA seq
189 aa
AA seq
DB search
MERISWNQYFMAQSHLLALRSTCPRLSVGATVVRDKRMIAGGYNGSIAGGVHCADEGCLL
IDNHCQRTIHAEMNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAEDYK
TQPYAKELFNQAGVKVEQVELDEMIIDLKNREKLSFVAGLIQQLSDAGVKEDELKKIHEQ
ANELFTSYV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgaatctcatggaatcaatattttatggcgcaaagccatttgctggcgctgaga
agcacatgtccgagactgtcagtcggggcaaccgttgtcagagacaagcggatgattgcc
ggcggatacaacggctcaattgcgggcggcgtccattgcgctgatgaaggatgcctttta
atagataatcattgccagcggaccatacatgcagagatgaatgcgattttgcaatgctct
aagttcggtgtgccgacggagggcgccgagatttatgtgacgcattatccttgtattcaa
tgctgtaaatcgattattcaggcaggcatcaaaactgtctattatgccgaagattacaaa
acacagccttacgcaaaagagctgttcaaccaagccggagtcaaggtggagcaggttgaa
cttgatgaaatgatcatcgatttgaaaaaccgtgaaaaattgtcttttgtagccgggctg
attcagcaattatctgatgcgggggttaaggaagacgaactgaaaaaaattcatgaacag
gccaatgagctgtttaccagctacgtataa
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