Bacillus amyloliquefaciens TA208: BAMTA208_16290
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Entry
BAMTA208_16290 CDS
T01824
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
baz
Bacillus amyloliquefaciens TA208
Pathway
baz00300
Lysine biosynthesis
baz00470
D-Amino acid metabolism
baz01100
Metabolic pathways
baz01110
Biosynthesis of secondary metabolites
baz01120
Microbial metabolism in diverse environments
baz01230
Biosynthesis of amino acids
Module
baz_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAMTA208_16290 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BAMTA208_16290 (dapF)
Enzymes [BR:
baz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BAMTA208_16290 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AEB25410
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All DBs
Position
complement(3088006..3088860)
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AA seq
284 aa
AA seq
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MNSFRFTKMHGLGNSYIYVNQFEEQLPEERLAEIAVKVSSVHTGIGSDGMILICPSEKAP
VKMRIFNNDGSEGKNCGNGLRCVAKYAYEHKLTEETSFFIETLSGLVKADITVDNGIVRE
VAVDMGEPRLTKKELPMLGNEEERTINETFVFGETELSGTAVSMGNPHIVFPVADISQAP
LTTLGPVIEKDPRFPEGINVEFVETVSADELHFRVWERGSGITQACGTGACAAAVASVLN
GVSERNREITVHLAGGDLVINWQDNGHVLMTGPAETVCSGVYYL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattccgttttaccaagatgcacggtcttggaaacagttatatatatgtaaac
caatttgaagaacagctgccggaagaacggctggctgagattgccgttaaagtgtccagc
gttcatacgggcatcggctctgacggaatgatcctcatctgcccgtcagaaaaagcgcct
gtcaaaatgcggatttttaataatgacggctctgaaggaaaaaattgcggcaacggcctt
cgctgtgtggcaaagtacgcatacgaacataagctgacagaagaaacgtcctttttcatt
gaaacgctctcaggccttgtaaaggcagacattactgtggacaacggaattgtgcgtgaa
gtcgccgtcgatatgggtgaaccgcgcctgaccaaaaaagagctgccgatgctcggcaat
gaagaagaacggacgatcaatgaaacctttgtttttggagagacggagctttcaggaaca
gccgtatcaatgggaaatccccatattgtctttccggttgccgatatcagccaagcgcct
cttacaacgctcggccccgtcattgaaaaagacccgagattcccggaaggcatcaatgtc
gagtttgtggaaaccgtcagcgccgatgaactgcatttccgcgtatgggaacgcggctcc
ggcattacacaggcttgcggaacaggcgcctgtgcggcggctgtcgcatccgtattgaac
ggtgtttccgaacgaaaccgggagatcaccgttcatttagccggcggcgaccttgtgatt
aattggcaggacaacgggcatgtgctgatgacaggccccgccgaaaccgtatgcagcggc
gtctattatttgtaa
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