Bacillus amyloliquefaciens TA208: BAMTA208_16825
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Entry
BAMTA208_16825 CDS
T01824
Symbol
yvrI
Name
(GenBank) co-sigma factor with YvrHa
KO
K26992
RNA polymerase sigma-O factor
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baz03021
]
BAMTA208_16825 (yvrI)
Transcription machinery [BR:
baz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAMTA208_16825 (yvrI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
UPF0122
MarR_2
Sigma70_ECF
GerE
PoNi_C
KORA
YPEB_N
DUF3597
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEB25517
LinkDB
All DBs
Position
complement(3188043..3188621)
Genome browser
AA seq
192 aa
AA seq
DB search
MDYQVLLRSKCKEIMKHPIVKHFLSDPKHYEKFKNVLEHSDEKDAKSLDEHFKQFYKEIR
IIKYMNSMIRIFSIDFDKRIRKNQKRYPLTVDQPEGGETLPYEMGKDAYEEFLRQQGDLS
QHVQNRDLYEALQTLTDKQKSVLTNIYLHGATMKEIAESLGESRQNISNIHKKGLGNLRK
QLDKQKKGENKQ
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggactatcaagttcttttacggtcaaaatgcaaggaaatcatgaaacatccgatcgtc
aaacattttttaagtgaccccaagcattacgagaaatttaaaaatgtgctggaacattca
gacgagaaagatgcaaaatcactggacgaacattttaagcagttttataaggaaatccgg
atcatcaaatatatgaactctatgatccggattttctccatcgactttgacaagcgcatc
cgcaaaaatcagaagcgctatccgctgacggttgatcagccggaaggaggtgaaacgctt
ccctatgaaatgggaaaagacgcgtatgaagagtttctgcggcagcagggagatttgagc
cagcatgtccaaaaccgggatttatatgaagcgcttcagacattaaccgataaacaaaaa
agtgtgctgacgaatatttaccttcacggagcgacgatgaaggagattgccgagtcgctg
ggggaatcccggcagaacatttccaatattcataaaaaagggctcggcaatctgagaaag
cagctggacaagcaaaaaaagggggaaaataagcagtga
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