Bacillus amyloliquefaciens TA208: BAMTA208_19525
Help
Entry
BAMTA208_19525 CDS
T01824
Symbol
licR
Name
(GenBank) BigG family transcription antiterminator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baz03000
]
BAMTA208_19525 (licR)
Transcription factors [BR:
baz03000
]
Prokaryotic type
Other transcription factors
BglG family
BAMTA208_19525 (licR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
HTH_11
Mga
HTH_Mga
HTH_DeoR
Trans_reg_C
PTS_IIB
PuR_N
SMC_ScpB
HTH_10
HTH_13
Motif
Other DBs
NCBI-ProteinID:
AEB26053
LinkDB
All DBs
Position
complement(3707817..3709772)
Genome browser
AA seq
651 aa
AA seq
DB search
MLHGRLRELLRLLLAAETPITSSVIAANVKVTTRTVRNDIKELQTVVEKNGASIQSVRGS
GYKLLIRNEQQFKNWLQDNFQQNSAVPIFPDERIHYLMKRLLLTDGCLKLDDLAEELFIS
KSTLQSDLKEVKKRLRPYDIVLETRPNCGFKLRGEELRLRYCMAEYLVDDREPEPDLLNE
KAGILPKEDIHVIRTAIMKQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSLIPEDL
HDIKLETEYQSAEAIVNELESALSVTFPEQETAYIAIHLLGTKRMTQSQIEGKEFTRLID
GETSRLTEAMIEAIERELELGITDDNELKTGLALHIKPAINRNRYGMNLRNPMLSAIKEN
YPLAFEAGVIAGIVIKEQTGIDIHENEIGYLALHFGAAIERRKTERPPKRCLIVCASGAG
SAQLLREKLRSRFGKRLEIVGTADYYSLDQLSFESIDFVVSTVPIKIDLPVPVLKVHTLL
GGGDFTKIDAMLEEKREQLNFLKPELIFLQQDLETKEDVIRFLGQKVAEAGLASDSLTDS
IFEREAISPTSFGNLTAIPHPLVPQTDTTFWAVCTLKKPIDWANKRVQFVCLLCVEKENK
ADLQHMYKWLGGMLDDQAAVSRLLKCTTYQEVLQVFRDKRSEKDRDTPFFR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgggcggcttcgtgaacttctgcgcttgcttttagctgctgaaacaccgatt
acaagctcagtcatcgctgcaaatgtaaaggtaacgacgcggacggtccgcaatgacata
aaggaactgcaaaccgttgtagaaaaaaacggcgcttccattcaatctgtcagagggagc
ggctataagctgctgatccgcaatgagcagcaatttaaaaactggcttcaggacaatttc
cagcagaacagcgccgtgccgatttttcccgatgaacggattcattatcttatgaaaaga
ctgcttctgaccgacggctgcctcaagctggatgacttggcagaagaactgttcatcagt
aaatcgactcttcaatctgatctgaaagaagtaaaaaaacggctccgcccttatgacatc
gttttggaaacaaggccgaactgcggatttaagctgcgcggcgaagagctccgcctccgt
tattgtatggcggaatacttagtggacgaccgcgagcctgagcctgatctcctgaatgag
aaggccggtattttgccgaaagaagacattcatgtgatccgcacagccattatgaagcag
gttcgaaaccacaagatcccgctttctttcttcggcctgaacaatctcatcatccatatc
gccattgcctgcaaacgaatccggacggaaaactatgtatctctcatcccggaggatctt
catgacattaagcttgaaacagaatatcagtcagcggaagccatcgtaaatgagcttgaa
tcggcgctttccgtcacctttcccgaacaggaaaccgcctatatcgccattcacctgctg
gggacaaagcgcatgacccagtcacaaattgaaggaaaagagtttacaaggctgatagac
ggggaaaccagccgtttaacggaggccatgattgaagccattgagagggagctggagctc
ggaatcacggacgacaatgagctgaaaacgggtcttgcgctccatatcaagccggcgatt
aaccgaaaccgctacggaatgaacctgagaaacccgatgctttccgctataaaagaaaat
tatccactcgcatttgaagcgggagtgattgcgggaatcgtgatcaaggagcaaaccggc
attgatattcatgaaaatgagatcggatatttggcgctgcatttcggagccgccatcgaa
aggagaaagacggaacggccgcctaaacgctgtttgattgtctgtgcgtccggcgccggc
agtgcgcagcttttaagagaaaagctgcgttcccggttcggaaagcgccttgaaatcgtc
ggaacggctgattactacagtcttgaccagctttcttttgagtcgattgattttgtggtc
agcaccgtgccgatcaaaatagacttgcccgttcccgtattaaaggttcatacgctgttg
ggcggcggggactttaccaaaattgatgccatgctggaagaaaagcgggaacaattgaac
tttctgaaaccggagctgatatttttgcagcaggatctggagacgaaggaggacgtcatc
cgttttctcggacagaaggttgcagaagccggcctcgcctctgattccctgaccgattct
atttttgaaagggaagcgatttctcctacgagcttcggcaatctcacggcgattccgcat
cccctcgttccccagacagacacgacgttttgggcggtatgcacgctgaagaagccgatt
gactgggcaaataagcgtgtccaatttgtctgcctgctctgcgtcgagaaagaaaacaaa
gccgacctccagcatatgtacaaatggctcggcggcatgctagatgatcaggccgcggtg
agccgtcttttaaaatgcacaacctatcaggaggttttacaagtattcagagacaaacga
tctgagaaagaccgggatacaccttttttccgttag
DBGET
integrated database retrieval system
