Bdellovibrio bacteriovorus HD100: Bd0197
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Entry
Bd0197 CDS
T00159
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Bd0197 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd0197 (xseA)
Enzymes [BR:
bba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Bd0197 (xseA)
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Bd0197 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
CAE77861
UniProt:
Q6MR97
LinkDB
All DBs
Position
183449..184855
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AA seq
468 aa
AA seq
DB search
MSDSPNQPLRKTDVSAQASLGAADLLTKNNEPSVLSVEQLNIYVKQLLEGQIGQVWVKGE
ISNFKAHTSGHFYFSLKDSRSQITAVMFRGNNARLKFKPTDGMEVIVRGRITVYEPRGNY
QLMCEMMEPVGAGALQKAFEQLKMKLKAEGLFESARKKPIPTFPRHIAIVTSPTGAAIRD
ILNVLSRRAKAIQVTVVPTIVQGEAAAPQICEAFKKATALPGVDVVIVGRGGGSIEDMWC
FNDERLARLIAASPVPVISAVGHEIDFTIADFVADLRAPTPSAAAELVAKSSGELANKVV
SLERMLHLTFEKKMKFLREKMLGLSKRLVDPKRRLQDLELRNDDLLNRLEFAINRRLAER
RHRVELMSQKLGSPQDLIDEKKKDLEYLKARSEKALHFSIERKKARMGKVMAMLDSLSPL
KVVERGYSIVTKNSEVIKSASQVKKGDLLDIRLAQGSVTAIVDGVKEE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctcctaatcagcctcttcgtaaaacagatgtttcagcccaagccagtctt
ggagctgcggacctattgacgaagaacaacgaaccttccgtgctttccgtcgagcagctt
aatatctatgtgaagcagttgctggagggtcagatcgggcaggtgtgggtgaagggtgaa
atttcaaacttcaaggctcacacctccggtcacttttatttcagcctgaaagattcccgt
tcccagatcacggccgtgatgttccgtggtaacaacgcccgtttgaaattcaaacctacc
gatgggatggaagtcatcgttcgcggccgcatcacggtgtatgagccgcgtggtaactat
cagctgatgtgcgagatgatggaacccgtcggtgccggagctttgcaaaaagctttcgag
caactgaaaatgaaattgaaagccgagggtttgtttgaatcagcccgcaaaaagccgatt
ccgactttcccaagacatattgcgatcgtgacgtctccgaccggagcggcgattcgtgat
attttgaacgttctttcccgtcgcgctaaagccatccaggtgacggtggttccaaccatc
gtgcagggtgaggcggcagctccacaaatttgcgaggcctttaaaaaagccaccgccctt
ccgggtgtggatgtggtgattgtcgggcgcggtggtggatccattgaagacatgtggtgt
ttcaatgatgaacggcttgcgcgtttgattgcggcaagcccggtcccggtgatttccgcc
gtggggcacgaaattgattttactatcgctgactttgtggcggacttgcgtgcgccgaca
ccttcggccgcggcagaacttgtggcgaaaagctcaggcgaactggccaacaaggttgtg
tcgctggagcgcatgctgcatctgacttttgaaaagaagatgaagttcctgcgtgaaaag
atgctgggtctttccaaacgactggtggatccgaagcgccgtttgcaggatctggagctt
cgcaacgatgatcttttgaaccgtctggagttcgcgatcaaccgccgtctggcggagcgt
cgccaccgggtggagctgatgagtcagaaactgggaagcccccaggatctgattgatgaa
aagaaaaaggatctggaatatctgaaggcacgttctgaaaaggcgctacatttttcgatt
gaaagaaaaaaggcccgcatgggcaaggtcatggctatgctggatagtctcagtcccctg
aaggtggttgagcgtggctattcaatcgtgaccaaaaattctgaagttattaaatctgcg
agtcaggtgaaaaagggagaccttttggatatccgcctggctcagggctcagtgaccgcc
atcgtggatggcgtgaaggaggaatag
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