Bdellovibrio bacteriovorus HD100: Bd0253
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Entry
Bd0253 CDS
T00159
Name
(GenBank) DNA methylation and regulatory protein Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bd0253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bba03000
]
Bd0253
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd0253
Enzymes [BR:
bba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Bd0253
Transcription factors [BR:
bba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Bd0253
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bd0253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CAE77912
UniProt:
Q6MR46
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All DBs
Position
complement(240179..241618)
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AA seq
479 aa
AA seq
DB search
MKKDDVFYNAMLARDPRFDGKFFVGVKTTGIYCRPICPAKPKRENVEFFSNHLAAEKAGY
RPCLRCRPESAPQSPAWIGKSALVRRAIRMIDKIETLEFNDNDFADLFGVSARHLRRLFI
EEVGKTPKQLSFENRLNLSRQLITETALPVTEVAFAAGFNSIRRFNDAFKERFKKSPSEI
RRKPVKDKSTLTIRLSYRPPFDFTGLLHFYRSHAVGQLEWFEEGLMHRIIEVNGKVGQIT
LSDLPDESCIKLEIDFPDTTALHTIISRVRSLLDLDSDPVIIANVLETDKDMKALLKKHP
GIRLPSSWDPFEVVVAAILGQVVSVERGRALVNDLIDLAGSDSGLLRDGKSVRLFPTPAQ
VIKADLKSLKTTTRRKETLVALSKALINGDLSLEPAQDVDSFVEKILGIPGIGPWTASYM
ALKALRHTDAFPATDLIIARAIAEHPKTKFESFSPWRGYVAALLWREYSQVLKKTGRKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggacgacgtcttttataatgccatgctagcccgggatcctcgttttgacggc
aagttctttgtcggcgtcaaaaccacgggcatctattgtcgccccatctgccccgccaaa
cccaaacgtgaaaacgtcgaattcttttccaatcatctggcggccgaaaaggccggctat
cgtccttgcttgcgctgccgaccagaaagcgccccacagtcaccggcgtggattgggaag
tctgccttggtccgccgtgcgatcaggatgatcgataaaattgaaacattggaattcaat
gataatgattttgctgatctgtttggcgtgagcgcccgtcacctgcgcagattgtttata
gaagaagtaggaaagaccccaaaacagctgtcctttgaaaaccgtctgaatctttctcga
caactgatcaccgagacagcgttgcctgtcaccgaggtcgcctttgcggccggctttaac
tccattcgcagattcaatgatgccttcaaagaacgttttaagaaaagcccctccgagatc
cgccgaaagcctgttaaagacaaatcgactttaaccatccggctttcttaccgcccccct
tttgatttcaccggactgctgcacttttatcgttcccacgcggtgggacagctggagtgg
tttgaagaaggccttatgcacagaattattgaggtgaacggcaaagtgggacagatcact
ttgagcgatctgcctgatgaatcgtgcataaagctagagatcgatttccccgatacaaca
gccttgcacaccatcatatcccgcgtgcgcagtctgctggatctggattcagatccggtg
attatcgcaaacgtgcttgaaaccgacaaagacatgaaggccttgctgaaaaaacatccg
ggcatccggctgccttcatcctgggatccgtttgaagtggttgtcgccgccattctgggt
caggtcgtgagtgttgaacggggtcgcgcactggtgaatgatttgatcgatcttgcaggc
agcgactcaggacttttgcgcgatggaaaatcggtgcgcctgttcccaactcctgcgcag
gtgattaaagctgatctgaaaagcttaaaaaccaccacccgacgcaaagagactctggtg
gccctttccaaggcgctgatcaacggcgacctttcgctggaaccagcccaggatgtggat
agtttcgtggaaaagatacttggcattcccgggattggcccgtggacagccagttacatg
gcattgaaggctcttcgtcacaccgatgccttccccgcgacagatttgattattgctcgt
gcgattgccgaacatcccaagaccaagtttgaaagcttcagcccatggcgcggctatgtc
gccgccttgttgtggcgggagtattcccaagtcttgaagaaaaccgggagaaagaaatga
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