Bdellovibrio bacteriovorus HD100: Bd0778
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Entry
Bd0778 CDS
T00159
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase, E3 subunit
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba00010
Glycolysis / Gluconeogenesis
bba00020
Citrate cycle (TCA cycle)
bba00260
Glycine, serine and threonine metabolism
bba00280
Valine, leucine and isoleucine degradation
bba00310
Lysine degradation
bba00380
Tryptophan metabolism
bba00620
Pyruvate metabolism
bba00630
Glyoxylate and dicarboxylate metabolism
bba00640
Propanoate metabolism
bba00670
One carbon pool by folate
bba00785
Lipoic acid metabolism
bba01100
Metabolic pathways
bba01110
Biosynthesis of secondary metabolites
bba01120
Microbial metabolism in diverse environments
bba01200
Carbon metabolism
bba01210
2-Oxocarboxylic acid metabolism
bba01240
Biosynthesis of cofactors
Module
bba_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bba_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bba_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bba_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Bd0778 (pdhD)
00020 Citrate cycle (TCA cycle)
Bd0778 (pdhD)
00620 Pyruvate metabolism
Bd0778 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
Bd0778 (pdhD)
00640 Propanoate metabolism
Bd0778 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bd0778 (pdhD)
00280 Valine, leucine and isoleucine degradation
Bd0778 (pdhD)
00310 Lysine degradation
Bd0778 (pdhD)
00380 Tryptophan metabolism
Bd0778 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Bd0778 (pdhD)
00670 One carbon pool by folate
Bd0778 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bba04147
]
Bd0778 (pdhD)
Enzymes [BR:
bba01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Bd0778 (pdhD)
Exosome [BR:
bba04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Bd0778 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
NAD_binding_8
HI0933_like
FAD_binding_2
DAO
FAD_binding_3
Thi4
Lys_Orn_oxgnase
AlaDh_PNT_C
Lycopene_cycl
UDPG_MGDP_dh_N
XdhC_C
3HCDH_N
NAD_binding_7
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CAE78730
UniProt:
Q6MPR7
LinkDB
All DBs
Position
complement(733471..734892)
Genome browser
AA seq
473 aa
AA seq
DB search
MQNFDVVVIGAGPGGYVAAIRSAQLGFKTAVIEREFLGGVCLNVGCIPSKAMITATHLLH
KAQHNFKEMGLNIKGGIDVDMKQLVKWKQSVSDKMSGGVNQLLKGYGVTIIKGDAEFKSS
KEISVKSSAGTESVQAKYFVVATGSRPIEIPGFKFDEKDICSSTGALAFDTIPKRVAVIG
GGYIGLEISSYLRKLGTEVTVIEAQSALLAGVVDPDCAQIVTRKLTKAGVNVLYGAKAKG
QKKVKDGYEVTVEINGKDEVVKCDKILVTVGRRPNGDQANLKAAGIQVDERGFVKVDAQR
RTNVSNIFAIGDIAGQPMLAHKASHEGVLVAEVIAGHNRVYDAKTVPAVVFTDPEIAAAG
MTEAEAKAKGHTDLLISKFPFAANGRAVSMMETDGFVKMIADKKTHVLLGVHIVGPEASN
LISEAVLAIEMGARIEDLALSIHPHPTLGETMMEAAEATLGHAIHIIQKPLKA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattttgacgtagtagttattggtgcgggtcctggcggttatgtggctgcgatc
cgttctgcacaacttggttttaaaacagcagttatcgaacgtgaattcctgggtggcgtg
tgcttgaacgtgggttgtatcccgtccaaagccatgatcactgcgactcaccttttgcac
aaagcccagcacaatttcaaagaaatgggcttgaacatcaaaggtggcatcgacgtggac
atgaaacaacttgtgaaatggaaacaatccgtttctgacaagatgtccggcggtgtgaat
cagcttcttaaaggctatggcgttaccatcatcaaaggtgatgctgaattcaagtcttcc
aaagaaatctctgtgaagtcttctgcagggactgagtcagttcaggcgaaatactttgtt
gtggcaacaggttcccgtccgattgaaatccctggcttcaagttcgacgaaaaagacatc
tgctcttccacaggcgctttggcgtttgataccatccctaagcgcgtggcggttatcggt
ggtggttacatcggtcttgagatctcttcttacctgcgcaagctgggcacggaagtgact
gtgatcgaagcacaatccgcattgttggcgggtgtggttgatccagactgcgctcagatc
gtgactcgcaaactgacaaaagcgggcgtgaatgttctttacggagcaaaagccaaaggt
cagaaaaaagtcaaagacggttacgaagtgactgttgagatcaacggcaaagacgaagtt
gtaaaatgcgacaagatccttgtgactgtgggtcgtcgtccaaatggcgatcaggcaaac
ctgaaagctgctggcattcaagtggacgagcgtggcttcgtaaaagtcgatgctcaacgc
cgcacgaatgtttccaacatctttgctatcggtgatatcgccggtcagccgatgctggcg
cacaaagcatcccacgagggtgttctggttgctgaagtgatcgcgggccataaccgtgtt
tacgatgcgaaaacagttccggcagttgtcttcaccgatcctgaaatcgcggcagccggc
atgactgaagctgaagcgaaagccaaaggtcacaccgaccttctgatcagcaagttcccg
ttcgcagccaacggccgcgcggtgagcatgatggaaacagacggtttcgtgaaaatgatc
gctgataagaaaacccacgttttgttgggtgttcacatcgtcggtccggaagcttccaac
ttgatctctgaagctgttttggcgatcgaaatgggcgcacgtattgaagacctggctctt
tccatccaccctcacccaactttgggtgaaaccatgatggaagccgctgaggcgactttg
ggtcacgcgatccatatcattcaaaaacctttgaaagcataa
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