Bdellovibrio bacteriovorus HD100: Bd0988
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Entry
Bd0988 CDS
T00159
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bd0988 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bba03019
]
Bd0988 (recQ)
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd0988 (recQ)
Enzymes [BR:
bba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bd0988 (recQ)
Messenger RNA biogenesis [BR:
bba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bd0988 (recQ)
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bd0988 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAE78922
UniProt:
Q6MP76
LinkDB
All DBs
Position
932638..934074
Genome browser
AA seq
478 aa
AA seq
DB search
MTDLLQLLKANFPFTSFRGEQEQVLHKVWANQNLLALMPTGMGKSLCFQFPAKTREGLVV
VISPLIALMQDQVFKAQELGISATFLSSTLSRDERESRQNRLAKGDFKLIYVTPERFRKP
EFLQAIEKRAIQLLAVDEAHCISQWGHDFRPDYSRVGEFRALLGNPPTLALTATATPEVQ
KDILKKLNMEDALIISAGIERPNLALNVHDIYGIDEKIRAIVGLRHLTPGTAIIYCSLIQ
TLKKVSSALNRLGMAHLVYHGDLPPQDRKRNQKAFQTEEAPLMIATPAFGLGIDKSNVRL
LIHAETPNSLESYFQEVGRAGRDGAESSCHLLYDQDDVSIQMEFLKWSHPEPDFIRKIYQ
LIEDKRMQVDQGGFDFLREQMNFRNRRDFRSEAAVSILERWGCLQKSDDPFPFACVQAPT
DEQFLAENDEAILRAQNTKLLQMVQWANQDSECRMNRIYAYFGHEHTEPCGKCDICKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcttcttcagcttttaaaagcgaactttccttttacttctttccggggcgag
caggagcaagtcctgcataaagtttgggcaaatcagaacctactggctttaatgcccacg
ggaatgggaaaaagcctctgctttcagtttccagcaaagacccgcgagggcctggtggtc
gtcatatcgccgctgatcgctttgatgcaggatcaggttttcaaggcccaggagctgggg
atcagtgccacgttcttaagttccactttgagccgggacgaacgcgagtcccgccagaac
cgcctggccaaaggcgacttcaagctgatctatgtgaccccggaacgcttccgtaaacct
gagtttcttcaggctattgaaaaacgggccattcaacttttggccgtggacgaggctcac
tgtatttcccaatgggggcatgacttccgcccggattattcccgggtcggagagttccgc
gcccttttgggcaatccgccgactttggcgctgacggccacggcgacgcccgaggttcaa
aaagacatcctgaaaaaactgaatatggaagacgccctgatcatttccgcggggattgag
cgcccgaacctggccctgaatgttcacgacatctatggaatcgatgaaaagatccgggcc
atcgtggggcttcgtcatctgacaccaggaacggcgatcatttattgctctttgattcag
acgctgaagaaagtttcgtctgcgttgaaccgactgggcatggcgcatctggtgtatcac
ggcgatttgccgccgcaggatcgcaagcgcaatcagaaagccttccagactgaagaagct
ccgctgatgatcgcgacgcccgctttcgggttgggcatcgataaaagcaacgtgcgcctg
ttgattcatgccgaaaccccgaactctttggaatcctattttcaggaggtcggtcgtgcc
ggtcgagacggggccgagtcatcttgtcatctgctgtatgaccaggacgatgtcagcatt
cagatggagtttttgaaatggtctcaccccgagcctgatttcatccgcaaaatctatcaa
ctgatagaagacaaaagaatgcaggtggatcagggtggatttgacttccttcgtgaacaa
atgaattttagaaatcgccgggacttccggtccgaagccgcagtcagtattctggaacgc
tggggatgtctgcaaaagtccgacgatccgtttccctttgcttgcgtgcaggcaccaacg
gacgagcagttcctggcggaaaacgacgaagctattttgcgcgctcagaacaccaaactt
ttgcagatggtgcagtgggcgaatcaggacagcgagtgccgcatgaatcgcatctatgct
tactttgggcatgaacacactgaaccgtgtgggaaatgcgatatctgcaaacgatag
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integrated database retrieval system
