Bdellovibrio bacteriovorus HD100: Bd1002
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Entry
Bd1002 CDS
T00159
Symbol
soxR
Name
(GenBank) redox-sensing activator of soxS
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
bba
Bdellovibrio bacteriovorus HD100
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bba03000
]
Bd1002 (soxR)
Transcription factors [BR:
bba03000
]
Prokaryotic type
Helix-turn-helix
MerR family
Bd1002 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_17
SKA2
HTH_3
LysM_MltD
HTH_IclR
Rv1828_C
DUF948
WHD_1st_NFRKB
TetR_N
Motif
Other DBs
NCBI-ProteinID:
CAE78936
UniProt:
Q6MP62
LinkDB
All DBs
Position
complement(949989..950462)
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AA seq
157 aa
AA seq
DB search
MAAKTTTPALTTTLSVGEVAARSGISVPTLHFYESKGLIKSHRNNGNQRRYDRSVLRLIS
IIKISQHLGMSLEQIKDHLSSLPQDHTPTATEWKRLTKKWNDDLEERIKLLQLLQSQLAS
CIGCGCMSLKECPLRNPEDRYGKKGTGAQRLREQCRI
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaaccacaacccctgccctcaccaccacactgtcggttggcgaagtcgcc
gcccgcagcggcatctcggttccgacgttgcatttctatgaatccaaaggactgattaaa
agtcatcgcaacaacggcaatcagcgccgctatgaccgctcggttttacgtctgatttca
ataattaagatctcccagcatctgggtatgagtctggagcaaatcaaagatcacctgtca
tcgctgccgcaggatcataccccgacggcgacggaatggaaacgactgaccaagaaatgg
aatgacgatctagaagagcgcatcaaattgctgcagctcttacaatcgcaactagccagc
tgcatcgggtgtgggtgcatgtcccttaaggaatgtccgttaagaaacccggaggatcgc
tacggcaaaaaagggaccggcgcacaacgcttaagagaacaatgccggatataa
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integrated database retrieval system
