Bdellovibrio bacteriovorus HD100: Bd1041
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Entry
Bd1041 CDS
T00159
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03030
DNA replication
bba03430
Mismatch repair
bba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bd1041 (holB)
03430 Mismatch repair
Bd1041 (holB)
03440 Homologous recombination
Bd1041 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bba03032
]
Bd1041 (holB)
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd1041 (holB)
Enzymes [BR:
bba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bd1041 (holB)
DNA replication proteins [BR:
bba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bd1041 (holB)
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bd1041 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAE78971
UniProt:
Q6MP27
LinkDB
All DBs
Position
985644..986588
Genome browser
AA seq
314 aa
AA seq
DB search
MARMLDFVLGHQETIKKMVESFENGKPGQTFLFVGPGGIGKKLTAMGLAQALLCPSSPRG
CGKCPSCFRISQGSHEGLKLIAPNGANIKMEQAKEVLEFLSLKSLTGNRVIVIDQAQTLN
PQAANSLLKTLEEPPEGTFFFLIAPSVAGILPTIRSRSRIVQFRPLTQEDLGKRVKAPAW
ALKAAGGSFEKLAQLQDGPEQEVREKAVELLTLFIQDADFLLNELWRNEFKDRAQGQRMI
SYWIGFLKDAICLQEGAKTQIVNLDQAPLIKVLAELERPRILNLIQKALQVEQAFAANRD
PQLIIEEFYVTSKA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcccggatgctggatttcgtcttaggacatcaggaaacaatcaaaaaaatggtcgag
tctttcgaaaacggaaagcccggtcagacctttttgtttgtgggtccgggcggcatcggc
aaaaaactgacagcgatggggctggcgcaggctctgttgtgtccttccagcccgcggggc
tgtggtaaatgcccttcttgtttccgcatttcccagggctcgcacgaaggtcttaagttg
attgcccccaatggggccaacatcaaaatggaacaagccaaagaggttctggaattcctc
agtttaaaaagtctgacaggcaaccgtgtgatcgtcattgatcaggcacaaaccctgaat
ccgcaggcggccaattctttgttaaaaactttggaggaaccgccagagggtacgttcttc
tttttaattgctcccagtgtggcggggattctgccgaccattcggtcccggtcccgcatt
gtgcagttccgtccgttgactcaggaggatctgggaaaacgcgtgaaagcgccggcctgg
gcgttgaaggccgcaggtggaagttttgaaaagctggctcagttgcaggatggtcccgag
caggaagtgcgcgaaaaggcggtggagcttctgactttgttcattcaggatgctgacttc
ctgcttaatgaactgtggagaaacgagttcaaagaccgcgctcaagggcagcgcatgatc
tcctattggattggcttcttaaaggatgccatttgtctgcaagagggtgctaaaactcag
attgtgaatctggatcaggcgccgctgatcaaggtcctggcagagctggaacgcccacga
attctgaatttgattcagaaagcgctgcaagtggagcaggcctttgccgccaatcgggat
cctcagctgatcatcgaagaattctacgtcacgtccaaggcttaa
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