Bdellovibrio bacteriovorus HD100: Bd1221
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Entry
Bd1221 CDS
T00159
Symbol
dppD
Name
(GenBank) ABC-type dipeptide transport system, ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bd1221 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bba02000
]
Bd1221 (dppD)
Transporters [BR:
bba02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Bd1221 (dppD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
ATP-synt_ab
AAA_16
AAA_29
nSTAND3
AAA_5
DUF87
PRK
RsgA_GTPase
NACHT
AAA_18
TsaE
ResIII
ABC_ATPase
MobB
NB-ARC
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAE79126
UniProt:
Q6MNM5
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All DBs
Position
1156963..1158672
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AA seq
569 aa
AA seq
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MSNTNIIEVRNLAVEFKTEDGIVQAVKGISFNIPKGKTVGLVGESGSGKSITSLAIMRLI
GNPGRVSSGEILFEGQDLLKVSEKKMREIRGARISMIFQEPMTSLNPVLTVADQITETLM
LHQNLNKQQALDKALDLLKQVGIPHAEERLYFYPHKFSGGQRQRIMIAMAIACNPDVLIC
DEPTTALDVTIQKQILDLLADIQKRTHMSLLFITHDLGVVADIADEVIVMNKGEIVERGV
SKEIFDNPKHPYTKGLLACRPSLDENPVRLPVLSDFMSAAGEEITPGARVYTPAKEIIRE
DKVILEVNDLKTHFPHTGGLLGRVQSYTKAVDGVSFKVKKGQTLGLVGESGCGKTTLGRT
LMRLIEPTDGQIIFDGQDITKLDYGHMHPIRKKMQIIFQDPYASLNPRMTIGTILMEPMQ
IHNIGENNNERREIAAEMLKKVGMSPAMMNRYPHEFSGGQRQRISIARALMVRPEFIVCD
ESVSALDVSIQAQILNLLLDLQDEMNLTYIFISHDLSVVKFISDEVAVMFGGKIVEHNTA
QAIYDAPQHDYTKKLLSAIPKGIPKELTV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacaaatattatcgaagtccgcaatcttgctgttgagtttaaaaccgaagac
gggattgtacaggccgtaaagggcatctctttcaatatcccaaaaggtaaaacagttggg
ttggtgggtgagtccggttccggtaaaagtatcacgtccctggcgatcatgcgtttgatc
ggaaatccaggccgtgtttccagcggtgaaattctatttgaaggccaggacctgctgaaa
gtttctgaaaagaaaatgcgtgagatccgtggtgcacgcatctccatgatcttccaggaa
ccaatgacatctttgaatccggttctgacggtcgcagatcaaatcactgaaaccctgatg
cttcaccaaaacctgaacaaacagcaggctttggacaaagctttggatcttctaaaacaa
gtcggcatcccgcacgctgaagaacgtctgtacttctatcctcacaaattctccggcggt
cagcgccagcgtatcatgatcgcgatggcgattgcttgtaatccggatgttctgatctgt
gacgagccaaccaccgcgttggacgtgacgatccaaaaacaaatcctggatcttctggca
gacatccaaaaaagaactcacatgagtcttttgttcatcacccacgatctgggtgttgtt
gctgacatcgctgatgaagtgatcgtgatgaacaaaggtgaaatcgttgagcgtggtgtt
tccaaagaaatcttcgacaatccaaagcacccgtacacaaagggtcttttggcgtgccgt
ccttctttggatgaaaaccccgttcgtcttccggttctttctgacttcatgagtgcagcg
ggcgaagaaatcacgccaggcgcacgtgtgtacactccagccaaagaaatcatccgtgaa
gacaaagtcattcttgaagtgaatgacctgaaaacccacttccctcacacaggcggtctg
ttgggtcgtgttcagagctatacaaaggctgtggacggcgtcagcttcaaagttaaaaaa
ggtcagaccctgggactggtgggtgaatccggttgtggtaaaaccactctgggtcgcacg
ctgatgcgtttgattgagccgacggacggtcagatcatcttcgatggtcaggacatcacc
aagcttgattacggtcacatgcatccgatccgcaaaaaaatgcagatcatcttccaggat
ccgtatgcttccctgaatccgcgtatgactatcgggaccatcctgatggaaccaatgcag
attcacaacatcggtgaaaacaacaacgagcgccgcgaaattgccgctgagatgctgaaa
aaagtgggcatgagcccggcaatgatgaatcgttatccgcatgagttctctggcggtcaa
agacagcgtatttccatcgcgcgtgctttgatggttcgtcctgaattcatcgtgtgtgac
gagtccgtgtctgcgttggacgtttccatccaggctcagattctgaatttgttgttggac
cttcaggatgaaatgaacctgacgtacatctttatctctcacgatctgtctgtggtgaaa
ttcatctctgacgaagtggcagtgatgttcggtggtaagatcgttgagcacaacacggct
caggcgatctacgatgcccctcaacacgactataccaagaagcttctaagcgcgattcca
aaagggatcccgaaagagctgacagtttag
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