Bdellovibrio bacteriovorus HD100: Bd1549
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Entry
Bd1549 CDS
T00159
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bba03016
]
Bd1549 (truB)
Enzymes [BR:
bba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bd1549 (truB)
Transfer RNA biogenesis [BR:
bba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bd1549 (truB)
Prokaryotic type
Bd1549 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAE79429
UniProt:
Q6MMS4
LinkDB
All DBs
Position
1475179..1476105
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AA seq
308 aa
AA seq
DB search
MTNKNQFNGLLLVDKPSGISSHDVVARLRRILSTRAVGHSGTLDPMASGLMACLVNEGTK
LSQYILEGDKGYRLRAQFGIRTDTLDTTGETLETRPTDHLTRELILSEALKLQGEMEVEV
PIYSAIKVQGKKLYEYARGEQEVTIPKKVMKFWDIEPVEIGSDWAEFDIKCSKGSYIRTW
IDLLGKALGCGAAMSGLRRTWSSPYKIDQAQTLEQIEASVKGGSLGPAFVPMELALPQVK
RIRIKGQDKVLLGNGQISHDLRSQLISAFNPDVDQYIQVLAQEGGELLAVIGLEPGRGFV
LRRVFKYS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaaaatcaattcaatggtctgctgctggtggataaaccttcagggatctcc
agccatgacgttgtggcgcgtttgcgccgcattctttccacgcgcgctgtggggcattcc
ggcactctggatcccatggcttcgggtctgatggcctgtctggtgaacgagggcacaaaa
cttagccaatacattctggaaggcgacaagggctaccgcctgcgtgcgcagttcgggatt
cgcaccgacaccctcgacacgaccggcgaaactttggaaacccgtcccacggatcatttg
acccgggaactgatcctgtccgaggccctcaagcttcagggcgagatggaagttgaagtg
cctatttactcggcaatcaaggttcagggtaaaaagctttatgaatacgcccggggcgag
caggaagtgaccattcccaagaaggtcatgaagttctgggatattgaacctgtggaaatc
ggctctgattgggcagaatttgatatcaaatgcagtaagggcagctatatccgcacctgg
atcgacctgctgggtaaggccttggggtgtggggcggcgatgagcggcctgcgccggacg
tggtcttcaccgtataaaattgaccaggctcagactctggagcagatcgaggcttcggtc
aaaggcggctctttaggccctgcttttgttcccatggagctggcgctgcctcaggtgaaa
cgtattcgaatcaaggggcaagacaaggtccttttggggaatggccagatcagccatgac
ctcagatcccagcttatttcggccttcaatcccgatgtggaccagtacattcaggttctg
gcccaagaggggggcgagcttttggccgttattggcctggagcccggccgggggttcgtt
ctacgcagggtatttaaatactcttga
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integrated database retrieval system
