Bdellovibrio bacteriovorus HD100: Bd1623
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Entry
Bd1623 CDS
T00159
Name
(GenBank) putative RTX family exoprotein
KO
K20276
large repetitive protein
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bd1623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1_2
RCC1
CUB
CUB_M02D8_5_3rd
Calx-beta
Big_3_3
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
CAE79499
UniProt:
Q6MMK5
LinkDB
All DBs
Position
complement(1553516..1562002)
Genome browser
AA seq
2828 aa
AA seq
DB search
MNCTFLNTIYLTQQAKRLLLSFSLMVLAGCSLELQIAAENSTPTTLKWSSDSLGQQGLLK
AEWILPEKADIKEQQVLYFRGDSCATPILPVANVGPAETSHLPTFTPEDGVEYTFKVFVL
SKDGSVASSSCSNPITYFGAFSIESLSQSIINEGNVTAAPFKGTCLLGSSIEFSAAATPL
LTFTCSDRQWTQNLDFSSLPNLYSGDLIATVTAPGGTPKEYRLAITKDVVPPTITLNALS
TITSVNQNAYTVSGTCSETGHNVSVTAGAVSAEVVCSGGTYSTSMNLSSLSGTSVVVSAT
HTDPVANTRTATSTVSRDVTGPAVNSLALNNGDAATNTLSATLNSSVTDAAEMYLSSVAA
CTGGSWVAYNAAAPWTLTNSNATNTVYAKFRDSLGNESPCVSDDILHDNVAPTLAFTLPV
SGTIINSDNVNAFTVSGTCSENNRSVNFSGPGGFTGTTICTGSAFSAILDLSALPQGTFQ
LTASLNDVAGNSNTANSPTYNKDTQAPTGTLSINSGSATTNDLAVSLGLTSADAAEMYVT
NTAGCATGGTWESFATGKSWTLPTADALNTVSVKFRDAAGNSSVCYDDSITHNSTVPSLS
LASPADGSFVNLANVSAFVISGACSEDGRPVEISVTGQSATTATCSSGAWTKTLDLSTSA
QGDLTFTLNHSRASGATAPTVTKVFAKDTVVPTVDSFVINNNDAYATSLSATLASTTTDG
VQMYATNTALCLNGGTWETYNASKSWTLPTANNTNTIYFKVRDVAGNESDCAFDSIIHDS
VSPTVTLTSPVAGTFINSLNQTALNLSGACSENGRLVNLTVTGHAGVTGSATCTTGSWTA
SLDFSSLADTSGTPFTVVASHSRVSGNNATASSTYPKDTQSPGAATITGAPTGTNSTSTL
NITVGGTDITHYRYFIVVPGGTEVCTNSTAYTGSDIPVATKITDTLTEQGAYKLCVFGRD
TAGNWSTATSQATWTRDTQGPVILTVDATTADGVYGPGQSVQVRVTFDENVTVTGTPQLT
LETGTTDRVVNYSSGSGTTQLLFTYVVQTGDETPDLDYTSTTALALNGGTMRDALSNNAT
LTLPAPGTANSLAGTKNIAVEAYSSPLAKAILSNTPMGADSSDTLNITVSGLDVVSYKYK
LGLSGSVDCSTYTDYSAEIPVATPITDTISAHPKYSFLKICVLGKDSTGKWQKAFAVTQA
QWHYVENLPSFNLCGTVKSSTAPKGRLYDSGGPTANYSDNETIANCYFSINTGAAISATV
SYDTENNISYDFLRLRETGAAGSVILGPVAGTVTNTAVNSTSGTLYAEFKSDGSVVGAGV
ILVWGGAPNLTPTMTLTNVTNATVNTVYSRVAAAYGLSTATVISVSGYDSEIRNVTTSSD
FSSSVLVNPGDAVEVRMTSPNATDQYRLAHVRAGDASYYWMVATPLLPTTVTHVTATNPD
GTYKPGDNIDIQVVFTKPVTVLGTNPVMTLAAGSGVTATYLSGSGSTELIFRYTVAYEHS
AADLDYSSTTLTNAASIKDAMGSNATATLPAIGSANSLAGRKNLVIEGYPFVVATASNVP
ASNNSTTTLDATVGGTNVVSYKYKLGTSATTDCTVATGYGSETAISSNITADLSAFANER
LKLCILGKHTNGTWQALWHPTEYQWDRFNVQNFSSMCSATATTATTGFIYDSGGASGQYQ
NNENCQFEINTGAPISLTFMAFNTEASWDKLSVYDGTTAGTLLLNQVSGTNIPATQTANS
GKMTIKFTSDGSAIRDGWVAYWGNPGPILTTPPTFAKIHNAALNTRYATANTTISSLNQT
AIATVTGADAQIRNITTGSYWGGSVAVSSGQVIQLRMTSPAANAQTNTATVTIGNAVSTW
EISTPYPPPTPTLTGYPVGTSTTSTLNVTVSGFRVTQYKKAIITSGTCAAATYSAAYNTS
TNITDNISALPNGPVTLCVLGGDATNLFQAAADAVSVTWTKDSISAVNITSTRMNRVQEG
SGPRTINVSLTPAKSYDVTTYYKVTGDAVNPDHHDLSSGFITFPAGSTTATITVNFPDNS
LVEGEKLLNLHFTHTDSPLATMGDNYQTQYFIADDEKNLKASQLSMARGHQCAIMEDSSL
RCWGTNMYRQIDGSVSDFKASPFVINIAGVTGYRSVSTGEFHTCTVTLDNRLFCWGNSSD
GQAGGGTTGNQWSPLHVDNTTTYLSVTSGDYHSCAITTANKLKCWGKNDYGQLGVNDTTL
RTSPTDVDNANSYKFVHAGSRSTCAIRSDDKLFCWGSNVNYQLGDGSATARGVPTAIDAA
ESYKSVAIGSKHACGITLTNNLKCWGTNNYGQVGDNGVTTRTTPVSVSGSEVYKTVSVND
DGNIATARGFTCAITSNDVLQCWGVNSLIQLGNGTSNMQYVPATSDAGTTYAAIQTSGSR
ACGITLTGALKCWGNLLGDTSPQSSYSYGSGNARHQYAEKMTKASEWTFDTLSVFGADAI
DDHYSGTCGISSNKLYCWGSMKATEGPFGDGSQTDARRPAPVMIDPSTNYSYIHTRRSHD
FCAITSAGQMKCWGINNYGELGEASAVSATVHTPTVADSTTTYTKVVSFNHATCGITTTG
VLKCAGNNDNGRLGLGDTTARTGFTVVDSGVSYSDVEMGMSHTCGRTTAGVLKCWGSNTQ
GQIAKASGTSAYYLPDVVDSGVTYTKIATGSFNSCGITSANKLKCWGANFLGQLGDGTSA
SRYTPTAIDASADYSDISMASGHTCGITAGQIKCWGNATYSGLAAPQYTGGHTVYMSPMV
VDGANTYTKVWAANSSTCAKATSGEVRCVGRAYGGNFGYVDSAVLMTIGSGITKIIYTPT
FIHKWQGY
NT seq
8487 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtacgtttcttaacaccatctacctaacccaacaggcgaaaaggcttcttctt
tccttttccctgatggttttggccgggtgttctctggaactgcaaatcgctgctgaaaac
tccacccccaccaccctgaaatggagcagcgattccctggggcagcagggtctgctaaag
gccgagtggattcttcctgaaaaagccgacatcaaagaacagcaggttctctatttccga
ggtgactcttgcgccaccccgattctgccggtagccaacgtcggtcccgctgaaacatct
caccttccgaccttcactcccgaagatggcgtcgagtacactttcaaggtcttcgtcctg
tctaaagacggcagcgttgcttcttcatcttgttcgaaccccatcacctattttggcgcc
ttttccatcgaaagcctttctcagtccattatcaatgaaggcaacgtgacggctgccccc
ttcaaaggaacctgcctgctgggatcctcgatcgagttttccgcagcggcgacacctttg
ctgaccttcacctgcagtgaccgtcagtggacacagaatctggatttcagctctttgcca
aacttgtacagcggcgacttgatcgccactgtcactgcccctggcggcacaccgaaggag
taccgtctggctatcaccaaagacgtggtgcctccgacgatcactctgaatgccctgtcc
accatcacctctgtgaatcaaaatgcttacacagtcagcggcacctgttctgaaacaggc
cataatgtttccgtcaccgcaggagccgtgagcgccgaagtcgtctgttctggcggaacc
tattcaacgtcaatgaaccttagctcgctatcaggtacgtcggttgtggtatcagcaact
cacacggaccccgtcgcaaatacgcgcacagccacatccaccgtcagccgcgatgtcacg
gggcctgcggtgaactctttggctctgaataacggcgatgcggcaacgaatacgctgagt
gcaactctgaacagctcggtcactgatgccgcagagatgtatctgagttcggtggctgct
tgtaccggaggaagctgggtcgcctacaatgcagcagccccttggactctgacaaacagc
aatgccacaaacacggtgtatgcgaaattccgcgacagcctgggtaacgaatccccgtgt
gtcagcgatgatattcttcatgacaatgtcgctccgactctggctttcacacttcctgtt
tccggcactatcatcaattccgacaatgtgaacgcgttcacggtcagtggcacctgttct
gaaaacaaccgatctgtgaacttttctggtccgggtggattcaccggaacgacaatctgt
acaggctcagccttttccgcgatcctggatctgagcgcccttccacagggaacattccag
ctgacggcttccttgaatgacgttgctggaaactccaacaccgcaaactcgccaacctac
aacaaagatacacaggctccgacgggaaccctgagcattaattcaggatcagccacaacg
aatgaccttgctgtttccctgggactgacaagtgcggatgcggcggaaatgtatgtcacc
aacaccgcaggttgcgctacgggtggtacttgggaatcctttgccacaggaaaatcatgg
acgctgccaacggctgacgccctgaacactgtttccgttaaattcagagatgccgcaggc
aactcttctgtttgttacgatgacagcatcactcacaacagcacggtgccgtcactgtct
ttggcctccccggccgatggcagctttgtgaatcttgccaatgtttcagcctttgtgatt
tccggcgcctgttctgaggatggccgcccggttgaaatttctgtgaccggtcagtctgcc
acaacagcaacatgttccagtggcgcctggactaaaactttggatcttagcacttcagcc
caaggggatctgacgttcactctgaatcactcacgcgccagcggcgcgacggccccgacg
gtcacgaaagtctttgccaaagacacagtggttccgacagtggacagctttgtcattaac
aataatgatgcctacgccaccagtctcagcgccacacttgcaagcaccaccactgacggc
gttcagatgtatgccacaaacacggctctgtgcctgaatggcggcacctgggaaacctac
aatgccagcaagtcctggacactgccgacagccaacaataccaatacgatttatttcaaa
gtccgcgatgtggccgggaatgaatctgactgcgcgtttgattccatcattcatgattcc
gtttcaccgacggtcacgctgacttctccggtggccgggacctttatcaattcattgaat
cagacagcattgaacctttccggcgcctgttctgaaaacggtcgtttggtcaacctgacc
gtcactggtcacgccggagtgaccggatctgcaacttgcaccacgggttcgtggacagct
tctttggacttcagttctttggccgatacttctggcactccattcacagtggtcgcctct
cacagccgagtcagcggcaacaatgccacagcatcatcaacttatccgaaagacacccaa
tccccgggagctgcgacaatcacgggggctccgacaggaaccaactccaccagcacacta
aacatcactgtcggcggcacggatatcactcactatcgttactttatagttgttccgggc
ggcaccgaggtctgcacaaacagtaccgcttacaccggaagcgatattcccgtagccaca
aaaatcaccgacacactgacggagcaaggggcctataagctctgcgtctttggtcgcgac
actgcaggcaactggtccacggcaacatcccaggcgacttggacaagggatactcaaggc
ccagtcatcctgactgtggatgccaccaccgctgatggcgtgtatggtccgggtcagtcc
gtgcaggttcgtgtgacgtttgatgaaaatgtaaccgtcaccggaactccgcaactgacc
cttgaaactggcacgaccgaccgagtggtcaactattccagcggctccggcacaacccag
cttctgttcacctatgtcgttcagaccggtgatgaaaccccggatctagattacaccagc
acgaccgcccttgccttgaacggcggaacaatgagggatgcacttagcaataacgccacc
ctgacacttccggccccgggaacggcgaattctttggcaggaaccaaaaatatcgccgtg
gaagcttactcaagtcctctggccaaagccattttaagcaacacaccgatgggagcggac
tccagcgacactcttaacatcactgtgtcgggtttggatgtcgtttcttataaatacaaa
ctgggattgtccggatctgtcgactgctccacatacacggattattcagctgaaattccg
gtggcgacccctattacggacaccatcagtgcgcatccgaaatattcgttcctgaaaatc
tgcgttctgggtaaagacagcacaggaaaatggcaaaaggctttcgccgtcacacaggcg
caatggcactatgttgaaaatctgccatccttcaatctgtgcggaaccgtcaagtcctcg
acggctcccaaagggcgtctgtatgactccggcgggccgaccgccaactacagcgacaat
gaaactattgccaactgctatttctcgatcaatacaggtgcggcgatttccgccactgtt
agctacgacactgaaaacaacatcagctatgatttcctgagactgcgtgaaacgggagct
gctggatccgtgattttgggcccagtggccggcaccgtcaccaacacggctgtcaactca
acctccggcactctttatgctgaattcaaaagtgacggctccgtggtgggtgctggtgtg
attctggtatggggaggagcccctaatctgacgcccaccatgacccttactaacgtaaca
aatgcgaccgtgaataccgtttacagccgtgttgcagctgcctatggccttagcacagcc
actgtgatctcggtttcaggttatgactcggaaattcgcaatgtcacaacctcttccgac
ttctcaagttctgtgcttgtgaatcctggagatgcggttgaagtccgcatgacttcacca
aatgcgacagaccaataccgactggcccatgttcgcgccggcgatgccagttattactgg
atggtggcgactccactgctgccaacaaccgtgactcatgttactgccacaaatcctgat
ggcacttataagccgggcgacaacatcgacattcaggttgttttcacaaaaccagtcacg
gttctgggtacgaacccggtcatgaccttggctgccggttccggcgtgacagccacatat
ctgagcggcagtggatccacagagctgatcttccgttacaccgtggcctatgaacacagt
gctgcggacctggactattcatcaaccacattaaccaatgccgcttccattaaggatgcc
atgggcagcaatgccaccgccacgctaccagctattggttcggcaaattccctggccgga
agaaaaaatctggttatcgaaggttacccatttgtagtcgccacggccagcaatgtgccg
gcttccaacaacagcacgaccactctggatgccacggtggggggcaccaatgtcgtatct
tacaaatacaaacttggaacatccgcaaccacggactgtactgttgcaaccggatatgga
tctgaaacagccatttcatccaatatcactgctgatcttagcgcctttgcaaacgaaaga
ctgaaactctgtatcctgggtaaacacaccaatggaacctggcaggccctctggcaccca
acggaatatcaatgggatcgcttcaacgtacaaaacttctcttcaatgtgttcagcgacc
gccacgaccgccaccaccggcttcatttatgactccggcggcgccagcggccagtaccag
aacaatgaaaactgtcagtttgaaatcaacacgggcgctccgatcagcctgaccttcatg
gcctttaacactgaagcctcctgggacaaactgagtgtctatgacgggacaacagctgga
actctgctgctgaatcaggtgagcggaaccaacattccagcaacacaaactgccaactcc
ggtaaaatgacaatcaagttcaccagtgacggaagcgccattcgtgacggctgggttgcc
tattggggaaatccaggccccatcctgacaactccaccgacttttgcgaaaattcataat
gcggctttgaacacccgctacgccacagccaatacaaccatcagttccctgaatcaaacc
gccatcgccacagtcacgggagcagatgcgcagattcgcaatatcaccacgggaagctac
tggggtgggtctgttgcagtttctagcggtcaagtcatccagttgcgcatgacctcccct
gccgccaacgcccaaaccaacacagccactgtcaccatcggtaacgcggtcagtacgtgg
gaaatcagcacgccttatccacctccgactccaacgctgacaggatatccggtcggcact
tcaacaacgtcgactttgaatgtgactgtctctgggttccgtgtgactcagtataaaaag
gcgatcatcacttccggcacttgtgctgctgcaacatactcggcggcttacaacacttcc
accaacatcaccgacaatatttcggctttgccaaatggaccggtgacgttgtgtgtgctt
ggtggtgatgccacaaacttattccaggcggcggccgatgcggtttctgtcacgtggact
aaggattccatttctgctgttaacatcaccagcacaagaatgaatcgggttcaggagggt
tcgggcccccgaacaatcaatgtcagcctgactccggcaaaaagctatgatgtgaccacc
tattacaaggtcaccggggatgccgtgaatccggaccaccatgacctgagctcaggtttt
atcactttcccggcgggctccacgaccgccacaatcactgtcaacttcccggacaacagc
ctggtggaaggcgaaaaattattgaatctgcacttcacccacaccgattcgccactggcg
acaatgggcgacaactatcagacacagtactttattgcggatgatgaaaagaatctgaaa
gcctcccagctttccatggcccgcggccaccagtgcgcgatcatggaagactcgtccctt
cgatgctggggtacaaacatgtaccgccagattgatggttcggtgagcgacttcaaggct
tctccgttcgtcatcaacattgcaggtgtgactggctaccgaagtgtttcaaccggtgaa
ttccacacttgcaccgtcactctggacaaccgcctgttctgctggggtaacagcagcgac
ggtcaagctggcggcggaaccacggggaatcaatggtcgccactgcacgtggacaacacg
acgacgtatctttccgtcacatccggagactatcactcttgcgccatcacgacggccaac
aagctgaagtgctggggcaaaaacgactatggccagttgggtgtgaatgataccacccta
cgcacgtcaccgactgacgtggacaatgccaactcttacaaatttgtccatgccggctcc
cgctccacctgcgctattcgcagtgacgacaagctgttctgctggggcagcaacgttaac
tatcaactgggtgatgggtcagcaacagcccgtggagttccgacggccattgacgccgcc
gaatcctacaagtccgtggctatcggatcaaaacatgcctgcggtatcactctgaccaac
aatctgaagtgctggggtacgaacaactatggtcaggttggtgacaatggtgtcacaaca
aggacaactccggtttccgtctcgggctcagaggtttacaaaactgtttccgtgaatgat
gacggtaatatcgcaacagcccgtggtttcacctgtgccatcacatccaatgatgttttg
caatgctggggcgtcaattcactgatacagctggggaacggaacttccaacatgcagtac
gtcccggccacatcggatgcgggtacaacctatgcagcaattcagacctctgggtcccgt
gcctgcggcatcacactgaccggcgccttgaagtgctgggggaatctgctgggcgacacc
tccccacaaagttcctacagctatggaagtggtaatgcccgccatcagtatgcagagaaa
atgaccaaagcgtccgagtggacctttgacacgctttccgtctttggcgctgatgccatt
gacgaccactattcaggaacttgtggaatatcctccaacaaactttactgctggggctcg
atgaaagcgacggaaggtccttttggtgacggctctcaaaccgatgcacgtcgcccagcc
ccggtgatgattgatccaagcacgaattacagctacatccacacccgcagatctcatgac
ttctgcgccatcaccagtgcgggacagatgaagtgctggggtatcaacaactacggcgaa
ctgggcgaagcctcagccgtcagtgcaactgttcatactccgaccgtggcagacagcacc
accacctatacgaaagtggtttcatttaatcatgcgacctgcggcatcaccaccactgga
gtcctgaaatgcgccggcaacaatgacaacggccgcctgggactgggagacaccacggcc
cgcaccggattcactgtcgtcgacagtggcgtcagctatagcgacgtcgaaatgggtatg
tctcacacctgtggtcgaacaaccgcgggcgtattgaagtgctggggtagtaacactcag
ggccagatcgccaaagccagcggcacctctgcctattatcttccagatgtggtggattct
ggcgtcacttatacgaagatcgccacggggtctttcaacagctgcggcatcacctctgcc
aacaagctgaaatgctggggagccaacttccttgggcaactgggggatggaacaagcgca
agccgttacaccccgactgcgattgatgcttcggctgattattcggatatttccatggcg
tcgggccatacttgcggcatcaccgccggacaaatcaaatgctggggtaatgcgacctat
tccggactggcagcgccccaatatacgggaggccacacggtctatatgagcccaatggtg
gtggatggcgccaacacatacaccaaagtgtgggctgcgaactcgtccacgtgcgctaaa
gccacgtctggcgaagtgcgctgcgtgggtcgcgcttacggcggaaacttcggctatgta
gattctgccgttttgatgactatcggcagcggaattaccaagatcatctacacgccaaca
ttcatacacaagtggcaaggctattga
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integrated database retrieval system
