Bdellovibrio bacteriovorus HD100: Bd2176
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Entry
Bd2176 CDS
T00159
Symbol
fpg
Name
(GenBank) InterPro: Formamidopyrimidine-DNA glycolase, FAPY-DNAglycosylase; hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bd2176 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd2176 (fpg)
Enzymes [BR:
bba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bd2176 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bd2176 (fpg)
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bd2176 (fpg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CAE80012
UniProt:
Q6ML45
LinkDB
All DBs
Position
complement(2078010..2078825)
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AA seq
271 aa
AA seq
DB search
MMPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAK
YLLLWTPKGAMLSHLGMTGTWRVAVPGDERLHDHIYLHFSGDLRLAYRDPRRFGCFDFVQ
DPLKHPKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVGVGNIYASEALFA
AGIKPTLPARKLSLERASLLVGEIKKILSQSIKAGGSSISDFAQASGESGYFQTSFRVYG
RDKEPCVTCGQQVKSKVLGGRNTFWCSRCQK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgatgcctgaacttccagaggtcgaagtcgtccgccggggcctggagaccatattaaaa
gaccagccaattttggaaaaagtcgaactgatgcgcaaagacctgcgcgagcctattcct
gctaaaaaaataagcactctggttggtcagccgctgacctccatcgagcgtcgcgccaaa
tacttgctgctctggacgcccaaaggcgccatgctgtcgcacctgggaatgaccggaacc
tggcgggtggcggtgccgggagatgaacggctgcatgaccatatatatctgcatttttcc
ggagacttgcgcctggcttaccgcgatccgcggcgttttggttgttttgactttgttcaa
gacccgttaaaacatcctaaattggcggatttggggccggagccgttagaggcggaattc
aatggaccgctgctgtgggaaaagctgcgcggcaaggatgtcgctctgaaagtggcttta
atggaccagaaggttgtcgttggtgtcgggaatatctatgccagcgaagcgttgttcgcc
gccggaatcaagcccacgctgccggcgcgaaagctgtccttggaaagagcttcgcttttg
gtgggcgagattaaaaaaattttatctcagtccatcaaggcgggtggatcttcgatcagc
gactttgcccaggcctctggcgaaagcggttattttcagacaagctttcgggtttacggt
cgggacaaagagccttgtgtgacttgcgggcaacaggtgaaatcgaaagttctgggcggg
cgaaacaccttctggtgttcgcgttgccaaaaataa
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