Bdellovibrio bacteriovorus HD100: Bd3200
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Entry
Bd3200 CDS
T00159
Symbol
murD
Name
(GenBank) hypothetical protein
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba00470
D-Amino acid metabolism
bba00550
Peptidoglycan biosynthesis
bba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bd3200 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Bd3200 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bba01011
]
Bd3200 (murD)
Enzymes [BR:
bba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Bd3200 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bba01011
]
Precursor biosynthesis
Amino acid ligase
Bd3200 (murD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
Pyr_redox
NAD_binding_7
Pyr_redox_2
2-Hacid_dh_C
Shikimate_DH
Pyr_redox_3
FMO-like
FAD_binding_3
DAO
NAD_binding_8
TrkA_N
ThiF
HcgC
NAD_binding_2
ApbA
3HCDH_N
F420_oxidored
KARI_N
THF_DHG_CYH_C
Sacchrp_dh_NADP
Tape_meas_lam_C
Motif
Other DBs
NCBI-ProteinID:
CAE80955
UniProt:
Q6MIF8
LinkDB
All DBs
Position
complement(3123228..3124616)
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AA seq
462 aa
AA seq
DB search
MYKEYSDLKDKRILVVGLGKTGVSLAHFLTKHGAQVTVTDHKSKPELSVQLEQLGELPIK
FELGGHSPKTFIAQDLVILSPGVPSNLKIFDYARSQGIKITGEFEFSAGFIKEPIIGLTG
TNGKTTVAKITEAILTESGVKTWVGGANEKPLVDYLRLDDKAQVVIAEVSSFMLEHCDTF
NPGNIVFTNLAENHLDRYRSMEEYVNAKRRIFKNTNQATTSILNADDNAVVELARDPAVQ
RGRIFYFSRKPALEPQIMNIGGAVNIGDEIRVRTGPEIESFNIKGMKMRGKHSVENIMAA
ILASREHGATREAVQKVINTFTGLPHRIEYVRKVGGVMFYNDSKATNVHAVLRALDTFDE
NVILIAGGKDTNLNYEPLRTSVKRKVKTLILVGEAKERINRDLGDFSETFLIGTFEEAVL
IAYQKSRIGDVVLLSPGCSSFDMFDSFEERGDYFKEIVRKFH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagagtatagtgatttaaaagacaaacgcattttggttgtgggattgggcaag
acaggggtttccctggctcacttcctgaccaaacatggcgcacaagtgacagtgacagac
cacaaatccaagccggagctttctgttcagctggagcaactgggtgagctgccaatcaag
tttgaactgggcggccacagtccgaaaaccttcattgcacaggatctggtgattctttcc
ccgggtgttccaagcaatctgaagatctttgattatgcccgttcccaaggcatcaagatc
accggtgaattcgaattctctgccggcttcatcaaagagccgatcatcggcctgaccggg
accaacggtaaaaccacagtggcgaaaatcactgaggcgattctgactgaatccggcgta
aaaacctgggttggcggagcgaatgaaaagccgctggtggattacctgcgtctggatgac
aaagcgcaagtggtgatcgcggaagtatcaagcttcatgcttgaacactgtgacactttc
aatccgggcaacatcgtgttcacgaacttggctgaaaaccacctggatcgttaccgttcc
atggaagaatacgtaaacgcaaaacgccgtatcttcaaaaacaccaaccaggcgaccacc
agcattttgaatgcggatgacaacgcggttgttgaactggctcgtgatccggcggttcag
cgcggtcgtatcttctacttctcgcgcaaaccggctttggagcctcaaatcatgaacatc
ggtggcgctgtgaatatcggcgacgaaatccgtgttcgcaccggtccagagatcgaaagc
ttcaacatcaagggcatgaaaatgcgcggtaaacattccgtggaaaacatcatggcggcg
atcctggcatcccgtgaacatggtgcaacccgtgaagcggttcagaaagtgatcaacact
ttcaccggtcttcctcaccgtatcgagtacgtgcgcaaagtgggcggagtgatgttctac
aacgactccaaagccaccaacgtgcacgcggtcctgcgcgctttggacacttttgatgaa
aacgtgatcctgatcgccggtggtaaagatacgaatctgaattatgagcctttgcgcacg
tccgtgaaacgcaaggtgaaaaccctgatcttggtcggggaagccaaagaacgtatcaat
cgcgaccttggtgacttctctgaaaccttcctgatcggtacatttgaggaggcggttttg
atcgcttaccaaaagtcgagaatcggggacgttgtcctgctttctccgggttgctcaagc
tttgacatgtttgacagtttcgaagaacgcggcgattatttcaaagaaatcgtgagaaag
tttcactga
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