Bdellovibrio bacteriovorus 109J: EP01_01920
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Entry
EP01_01920 CDS
T03079
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03420
Nucleotide excision repair
bbac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP01_01920
03430 Mismatch repair
EP01_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_01920
Enzymes [BR:
bbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP01_01920
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP01_01920
MMR (mismatch excision repair)
Other MMR factors
EP01_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_14
DEAD
ResIII
CpeS
Motif
Other DBs
NCBI-ProteinID:
AHZ83708
LinkDB
All DBs
Position
410439..412727
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AA seq
762 aa
AA seq
DB search
MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILC
VTFTNKAAKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYD
SSDQLSQIKKVMTALDINDKMYPAKNFQSRISSAKMMGLSPEGLEKSSKRLMDQKTVEVY
KAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQ
MLASAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT
AVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEGSYNDYAIF
YRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALKRIINV
PARGIGKTTIEKIEEYAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQ
HLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEESTLISFL
EEMALVNDVDSLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDNEQDVE
EERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDFKTSAEAPRFM
ARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYENDGAGSAPFSKGMRVRH
PTFGVGTVYATEGTGENFKVSVMFTDNTVKKFVVKYARLERV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacttgattttgttacgaaaaatctgaaccccgcgcagaaggatgcagtcgaa
accctggaagggcctttgcttatccttgccggcgccggttcgggcaaaactcgcgtgctc
acccaccgcatggccaacatgatcggccagggggtcgcggcttccgacgaaatcctgtgt
gtgacctttaccaataaggccgccaaagagatggaacatcgtatttacaagattctgtcg
gacatgggcgccgtggttcaaacccagctttggatcagcacattccacagcttctgcgtt
cgtgttctgcgccagcacatcacacttctggattacaagcccttcttcggtatctatgat
tcctccgatcagctcagccagatcaagaaagtcatgaccgcgctggatattaacgacaag
atgtatcccgcgaaaaacttccagagccgtatcagcagcgccaagatgatgggtctttcc
ccggaaggtttggaaaaatcctcgaagcgtctgatggatcaaaagaccgtggaagtttac
aaagcctatgagcgcgaaatgaaaaaggccaacagccttgatttcgatgatctgcttttg
aaaacctatgatctgttccgcatgtaccctgatgttctgcagatgtatcagaaaaaattc
cgctacatcatggtggacgagtaccaggacaccaatcacattcagtaccttctggtgcag
atgctggcttccgctcaccgcaacttgtgcgtagtgggtgacgaggatcagtcgatctac
agctggcgtggggccgatatcaaaaacatcctggattttgaaaaagacttccgtgatgcg
aaggtgatcaagcttgaggaaaattaccgatccagcgccaacatcgtcaatggcgccacg
gccgtaatcaaaaacaactcgcaacgcaaagacaaaactcttttcacatcgaacgatccg
ggtgatctgattcacgtgcgcgaggaaaagaacgagtacgaagaaggccgctttgtcgcc
aagaccattcagtcgatgatgaatgagggcgaaggctcttacaacgactatgcgatcttc
tatcgcaccaatgcccagtcgcgcgttctggaagaacaactgcgcaccatgggcattcca
tatcgcctggtgggcggcgttcgcttctatgaacgcatggaaatcaaggacatgatttcc
tacctgaagctgtccatcaatccggcggatgatatcgccttaaagcgcatcatcaacgtt
ccagcccgcggtatcggcaaaaccacgattgaaaaaatcgaagaatacgcggctcataaa
aacttgagcatgttcgaagcggccgaaaaagcctgcgaagagcgcctgttcaatgccggc
accaccggcaagatccgtcgttttatcgacctgatgaaagaccttcagcaaaacgcccag
catctgaaactgctggaattctttgccgtggttctggatcgcacggaatatctggcggct
ttgaaaaaagacgaatctccggaatcccaggcgcgcatcgaaaacttggaggaactggac
aacgccattgcccagttcgtgcaagagcgcggtgaagaatccacactgatcagcttcctg
gaagaaatggctttggttaacgatgtcgattctttggatcaggagcagaattcagtgacc
atgatgaccctgcacatctccaagggtcttgagtatccgtacgtgtttgtggtggggctt
gaagaaaatctgttcccaagtgcgcgcagcgcagaaagcgacaacgagcaggatgtcgag
gaagagcgccgcctggcttacgtgggcatgactcgcgctcgtcagaagctgtggctgacc
tatgcgaaaatgagacgcgtgtggggccaggagcagttcaatcctccgtcgcgattcatt
aaggaaatcccgcagaatctgatcgactttaaaacgtccgccgaagcgccgcgctttatg
gcccgctatggttccagctcttatgactctgactttggcggcacgccgaaatggggcgcc
actagcagcgatcgcaaccgcgcacgcacacaaagttacgatgatgcacaagacttcccg
gattacgaaaatgacggggccggctctgcacccttttccaaaggtatgcgcgtcagacac
ccgacgtttggtgtcggcaccgtgtatgccacggaaggcactggcgaaaacttcaaagtc
agcgtgatgttcacggataacaccgtgaagaaattcgttgtgaagtacgcccgcctggag
cgcgtgtag
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