Bdellovibrio bacteriovorus 109J: EP01_06415
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Entry
EP01_06415 CDS
T03079
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03030
DNA replication
bbac03430
Mismatch repair
bbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP01_06415
03430 Mismatch repair
EP01_06415
03440 Homologous recombination
EP01_06415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbac03032
]
EP01_06415
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_06415
Enzymes [BR:
bbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP01_06415
DNA replication proteins [BR:
bbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EP01_06415
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EP01_06415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AHZ84569
LinkDB
All DBs
Position
complement(1341404..1344943)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSFVHLHVHSEYSLLEAACRVKAIAKKAAAMQMPAVALTDNGNMFGAVEFFFACKDNNVK
PILGLDAYIAPGSRLEKKQDRDQVNTGPRRLVFLAQNNDGYRNLCKLSSIGYQEGFYWKP
RIDYEVIQQYNENLICLTGGLRGEVAESFLREGPDAALAKIRQLKEIFNDRLYLEMCRTG
VAEWDRLNPFLLEASKITGVPVVASNDVHYMTQDDQMAQEVLICIGSNKTLSDESRFRLG
TDEFYLKKPEQMTELFADVPEAIANTLQIAERCDVKFKLKDDQGKPIYHLPTFPTDDGLS
LKEDIARKAKAGLLVRFEEAAARGEMIPEDKIPEYDKRLEYELGIIDRMGFNGYFLIVQD
FINWAKVNDIPVGPGRGSGAGSLVAYVLRITDLDPLPNFLLFERFLNPERISMPDFDIDF
CQDRRQEVIQYVTRKYGQESVSQIITYGKLQARAAIKDVGRVLGMTFPEVDAVTKLIPEK
LGINLKEAMEMEPRIGEMMEMNPTVNTLMDLAQRVEGMVRHAGIHAAGVIIADGQLVRHA
PLYKGADGEQVVQYDMKHAEKIGLIKFDFLGLKTLTHINHALKLILKNRGKKIQSQMIPM
TDAATFEMMSRGDTAGVFQFEGEGITDATRKIRPSSFADVTAITSLYRPGPMANIPDFTD
RKHGKAPVEYLLEDTREVLSETYGIMVYQEQVMGIASRIAGYSLGEADMLRRAMGKKIKE
EMDQHRERFMKGAIERGHDKQRSSDLFDLMYKFADYGFNKSHAAAYSVVTIQTAWLKCHY
PAEFFAALLSTELSDTEKIVKYSKDATKRGLTVRSPSVNFSDYLFDVHGDEIYFGLGAIK
GVGQNAVEAIIEARNNLPEKKFNSLDEFFNSIDTRRVNKKVIECLIKAGAFDGFGAHRAQ
LVAGYQKYLDRAIGLQKDREMGQSSLFDLGPSTETKVTLEEVKPWARTASLTYEKEVLGF
YLSDHPLKGFDTLSELWTTCKVIDLPAQMPAPGSPEAEALKAAKKDWKNRDAGKKRVVVA
GLITELRELITKKGTRMAFGKVEDLTGSCELVIFPDSYARFEAQLRDERPVLVGGGLEVE
EGSAKIMVDTVSPLEDILKKTKRMVLRLDKINPDDYPRLQSLMKDYPGATSVSLEIELGE
LNRRVLMEMEEAQGINVNNEFFEGVHSLFGRTDFIELRS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcatctacacgtccactcagaatattcccttttggaagccgcatgccgg
gttaaagccattgccaaaaaagcagcggccatgcagatgcccgcggtggcccttactgac
aacggcaacatgttcggtgctgttgaatttttctttgcctgtaaggataacaacgtaaaa
ccaattctgggtttggatgcgtacatcgcgccaggttctcgtcttgaaaaaaagcaggat
cgtgatcaggtcaacaccgggccacgccgcttggtgtttctggcgcagaacaatgatggt
tatcgcaatctgtgtaaactttcttccatcggctaccaagagggcttttactggaagcct
cgtatcgattacgaagtcattcagcagtacaacgaaaatctgatctgtttgacgggcggc
ttgcgcggtgaagttgcagagtccttcctgcgtgaaggtccggatgcggcgttggcgaaa
attcgtcagctgaaagaaatcttcaacgatcgtctgtatcttgaaatgtgccgcaccggt
gttgcggaatgggatcgtctgaatccattcctgctggaagcttccaagatcaccggagtt
cctgtcgtggcgtccaatgacgtgcactacatgactcaggatgatcagatggctcaggaa
gttttgatctgtatcgggtcgaataaaactttaagtgacgaatcccgtttccgtctgggc
acggatgagttttatttaaaaaagccagagcagatgaccgagctttttgctgatgtgccg
gaagcaatcgccaacactctgcaaatcgctgaacgctgcgatgttaaattcaagctgaaa
gatgatcagggaaaaccgatctatcaccttccaacattcccgacagacgatggtttgtcg
ttgaaggaagacatcgcccgcaaagccaaagcaggccttttggtgcgctttgaagaggcc
gccgcgcgtggcgagatgataccggaagacaaaattccagagtacgacaagcgtctggaa
tatgagttgggtattatcgatcgtatgggttttaacggttacttcctgatcgtccaagac
ttcatcaactgggcgaaggtgaatgacattccggtggggccggggcggggttccggtgcc
ggctctctggttgcttatgttttgcgtattacggatttggatccgcttcctaatttcctt
ctgtttgagcgtttcctgaatcctgaacgtatctcgatgcccgacttcgatatcgacttc
tgtcaggatcgtcgccaggaggtgattcagtatgtaacccgcaagtatggtcaggagtct
gtttcccagatcatcacttacggtaagttgcaggcccgtgccgcgatcaaggacgtggga
cgcgttctggggatgaccttcccggaagtcgatgccgtgacaaaactgattccggaaaaa
cttggcatcaatctcaaagaggccatggaaatggaacctcgtattggcgagatgatggag
atgaatccaacagtgaacacactgatggatctggcgcagcgggtggaggggatggttcgc
catgctggtatccacgccgccggggtcatcatcgccgacggacagctggttcgtcatgct
ccgctctataagggtgctgacggcgagcaggttgttcagtacgacatgaagcacgccgaa
aaaatcggcctgatcaagtttgacttcctgggtctgaagaccctgacccatatcaatcac
gctttgaagctgattttgaaaaaccgtggcaaaaaaatccagtcacagatgattccaatg
acggatgcggcgaccttcgaaatgatgtcccgcggggataccgccggggtgtttcagttc
gagggtgagggcatcaccgatgccacccgtaaaatccgtccttcttcgtttgccgatgtc
actgcgatcacgtcgttgtaccgaccgggtccaatggcgaacattccggactttaccgat
cgtaaacacggtaaggcgccggtggaataccttttggaagacacccgtgaagttctgtcc
gagacctacgggatcatggtctatcaggaacaggttatgggtatcgcctcgcgcattgcc
ggatactctctgggtgaagcggatatgcttcgtcgtgcgatgggtaagaagatcaaagag
gagatggatcagcaccgcgaacgcttcatgaaaggggcgattgagcgcgggcatgacaaa
caacgttcatcagatctgtttgatctgatgtacaagttcgccgattacggtttcaataaa
tcccacgccgctgcgtactcggtcgtcaccattcagacggcctggctgaaatgtcattac
ccggcggaattcttcgccgctcttctcagtaccgagctttcggatactgaaaagatcgta
aaatactccaaggatgccaccaagcgtggtctgaccgtgcgttcgccaagcgtgaatttc
tcggattatctgtttgatgttcatggcgatgaaatttacttcggcctgggggcgatcaag
ggcgtggggcagaatgcggtcgaggccatcattgaggcccgcaataatctgcccgagaaa
aaattcaactctttggatgaattctttaattccatcgacacccgtcgtgtgaataaaaaa
gtgatcgagtgtctgatcaaggccggggcttttgatggtttcggggcgcaccgtgcgcag
ttggttgccggctatcagaaatatctggatcgtgccatcggtctgcaaaaagaccgtgaa
atggggcagtcttcgttgtttgacctgggaccatcgacggaaaccaaagtgactttggaa
gaagtaaaaccctgggcacgaacggcgtctttgacttacgaaaaggaagttctgggcttt
tacctgagtgatcaccccttgaaggggtttgacacgctttccgagctttggacaacgtgc
aaagtgattgatctgccggcgcagatgccggctccgggcagtcctgaggcggaagctctg
aaggcggccaaaaaagactggaagaaccgtgatgcgggtaaaaaacgtgtcgtggtggcg
gggctaatcacagagcttcgtgagctgatcactaaaaagggaactcgcatggcgttcggc
aaggtcgaggacctgacgggcagctgcgagctggtgatcttcccggattcctatgcgcga
tttgaagcccagttgcgcgatgaaagaccggtcctggtcgggggtggtctggaagtggag
gaaggatcagccaaaatcatggttgatacggtctctccattggaagatatccttaaaaaa
accaagcgaatggtcttaagattggataagattaatcctgatgattaccctcgtttgcag
tctttgatgaaggactatccgggagcaacctcggtcagtctggaaatcgagttgggcgag
ctcaaccgtcgtgtcctgatggagatggaagaggcgcaggggatcaatgtgaacaatgaa
ttctttgaaggtgttcattccctgtttggaagaacggactttatcgagttgaggagctag
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