Bdellovibrio bacteriovorus 109J: EP01_07830
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Entry
EP01_07830 CDS
T03079
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP01_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_07830
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP01_07830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
GIY_YIG_2
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
AHZ84844
LinkDB
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Position
complement(1606313..1608205)
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AA seq
630 aa
AA seq
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MASSKFEEVRDKVKEFPTQSGVYLMKNTADKIIYIGKAKNLRNRVRSYFNDSKDHSPKTR
LLVSNICEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLRDDKAYPYIRFSWGDQAPRLY
LARKVKKDGSLYFGPYTSGLAVHGTIKFLNRTFKIRDCTDAVFKSRTRPCMTYQIGRCTA
PCVKYITMEDYRNEVEGAKLFLKGQNKKVIKSMTEKMMGAADEEKFEVAARLRDSIEAIK
AILQKQAVINDTSEKDQDALGYYGDERGCLIETVHIRAGRVIGTRPHYLPHFDPNDSVED
PREWLVDFLNQYYEDNFIPDEVLLPLDIGNDLTKLMEEVLKERSGSKTTVRFATDERGRN
LVDMAHENAKSHFLKYVSKSEEKLRGLEEIKERFNLPERPRRIECYDISTFQGAETVASQ
VVFEDGVPAKEHYRRYKIKTVQGINDFASMYEVLSRRFKHTEYDDPQLIVIDGGKGQLSQ
AMKILEEIGRKDIPVVGLAKARTESDFQKQEVESTEERFFLPGRSNPVIFKHNAEALYIL
SGIRDEAHRFAITYHRKLREGTSLESELDYVVGLGEKRKKVLLTQFNSIDEIKMADPEEI
AKLKGFNRVLAERILLQLNESEEEETEVEE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagtaagttcgaggaagttcgcgacaaggtaaaagagtttccgacgcaaagt
ggtgtttatctgatgaaaaacaccgccgataagattatctatatcgggaaagcgaagaat
cttagaaaccgtgtgcgcagctactttaacgacagcaaggaccacagtcccaagacgcgt
ttgctggtttcgaacatctgcgaagttgaatacattctgactaaaaccgaggttgaagca
tttttgctggaagcctcgctgatcaaaaaacaccgccccaaatacaatatccgattgcgc
gatgataaggcctatccttacattcgttttagctggggtgatcaggcgccaagactgtat
ctggcgcgcaaggtgaaaaaagacgggtctttgtatttcggtccctacacttcgggtttg
gccgtgcatggcacgatcaagtttctgaacaggaccttcaaaatccgcgattgcaccgat
gcggtctttaaatcccgcacacgtccttgcatgacctatcagatcggccgttgtacagcc
ccttgtgtgaagtacatcacaatggaagattatcgcaacgaagtcgaaggggcgaagctg
ttcctgaaggggcaaaacaagaaggtcatcaagtcgatgactgaaaagatgatgggcgca
gcggacgaggaaaagttcgaggtcgccgcccgtttgcgtgactccattgaggccatcaaa
gccatcttgcagaagcaggcggtcatcaacgacacctccgagaaagatcaggatgctttg
ggttactatggcgatgaacggggttgtctgattgaaaccgttcacatccgtgccggacgc
gtgatcggcactagaccacactatctgcctcactttgacccgaacgactccgtcgaagat
ccgcgcgagtggctggtggacttcctgaatcagtactatgaagacaacttcatcccggac
gaggttctgctgcctttggatattggcaacgatttgaccaagctgatggaagaagtcctg
aaggaacgttccggcagtaaaaccacggttcgatttgccaccgatgaacgggggcgcaat
ctggtcgacatggcccatgaaaacgccaagtctcacttcctgaagtatgtctctaagtcc
gaagaaaagctgcggggcttggaggagatcaaagaacgtttcaatctgccggaacgtccg
cgtcgtattgagtgttatgatatctccaccttccagggggctgaaaccgtggcctctcag
gtggtgtttgaggacggggttcccgccaaagagcattatcgtcgttacaagatcaaaact
gttcaggggatcaatgactttgcctcgatgtacgaggttttaagccgtcgattcaaacac
acagaatatgatgatccgcagctgatcgtgattgatggtggcaaggggcagttgtcccag
gccatgaagatactggaagagatcgggcgcaaggacatcccggtggtgggtctggccaag
gcgcgcacagaaagtgatttccaaaagcaggaagtggagtcgaccgaagagcgcttcttc
ctgccgggtcgttccaatccggtgatctttaagcacaatgccgaggcgttgtatattctg
tcgggcatccgcgatgaagcccatcgttttgccatcacttatcaccgcaagctgcgcgaa
ggcacgtcgcttgaaagtgagttggattacgtcgtcggcttgggggaaaaaagaaagaaa
gttcttttgactcagttcaactctattgatgaaatcaaaatggctgatccagaggaaatt
gcaaaactgaagggctttaaccgggtcctggcagaacgtattttgctgcagcttaatgaa
agtgaagaagaagaaactgaggttgaagagtga
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