Bdellovibrio bacteriovorus 109J: EP01_07835
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Entry
EP01_07835 CDS
T03079
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP01_07835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_07835
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP01_07835
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EP01_07835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
DUF8810
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHZ84845
LinkDB
All DBs
Position
complement(1608192..1610267)
Genome browser
AA seq
691 aa
AA seq
DB search
MASAYKKNFQLVSEFKPSGDQPKAIEQIAENFNAGLKHQTLLGVTGSGKTFTMAHTIANL
NQPALVLAPNKTLAAQLYAEFKELFPHNAVEYFVSYYDYYQPEAYIPSTDTYIEKDSAIN
EQIDRMRHSATRSLFDRRDVIIVSSVSCIYGLGSPEAYEGMMIQIVSNTSMKRDHLLREL
IRIQYQRNNVDFSRGTVRVRGDNVEIFPPYEEERAVRVEFFGDYIERLSWIDPLTGQILE
ELDQIGIYPGSHHVTSDDSLKRAIKTIQDELRDRLVQLNQEMKLLEAQRLEQRTYYDIEM
MEQMGFCQGIENYSRHMTGRGPGEPPPTLLEYFPKDFVTFIDESHVTVPQIGGMYRGDRA
RKMNLVEHGFRLPSALDNRPLNFQEFEAMMDKVVYVSATPGSYELQKSEGVIVEQIIRPT
GLIDPIVEVRPVKHQVDDLLKEIRIRVSKQERVLITTLTKRSAEDLTEYYENLGIKVKYL
HSEIDTMERMEILRDLRLGVFDVLVGINLLREGLDIPEVSLVGITDADKEGFLRSERSLV
QTIGRAARNLNGRVILYGDTVTESMEKAINETERRRRIQSEYNEAHGITPQSVKKRIRDG
LGEMFDGTVSTPLGGENKSAAIMQKFAQQPEKIQQEITKLRARMKELSANLEFEEAAKIR
DEIKRLQIVELNVRSGEIEQESAEVVKDGLK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcatataaaaagaactttcaattggtgtccgagtttaaaccttccggtgat
cagccgaaagcgattgagcagattgctgaaaacttcaacgcaggtttgaagcaccagaca
ctgctgggtgtgaccgggtcgggcaagaccttcacgatggcgcacaccattgcaaacttg
aatcagcccgcgctggtgctggctccgaataaaactttggcagcgcaattgtatgcggag
tttaaagaactgttcccgcacaatgccgtggaatactttgtcagctattacgattactat
cagccggaagcttatattccttccactgacacctatatcgaaaaagattcggctattaac
gaacaaatcgatcgaatgcgccactcggcgacgcgttcattgtttgatcgtcgtgatgtg
atcatcgtcagctcggtgtcatgcatttatggtttgggttcgcccgaggcttatgaaggc
atgatgatccaaatcgtctccaacacctcgatgaagcgcgatcacctgctgcgtgagttg
atccgtattcagtatcagcgcaacaacgtggacttctcgcgcggaacagtgcgagtgcgc
ggggacaatgtcgaaatcttccctccgtatgaagaagagcgcgccgtgcgtgttgaattc
ttcggcgactatatcgagcgcctttcctggattgatcctttgaccgggcagattctggaa
gaacttgaccagattggtatttatccgggaagtcaccacgtcaccagtgatgattcatta
aaacgcgccattaaaaccattcaggatgaactgcgcgatcgtctggtgcagttgaatcag
gaaatgaaactgcttgaagcccagcgactggaacaaagaacctattacgacatcgagatg
atggaacaaatgggtttctgccaggggattgaaaactattcccgccacatgacggggcgg
ggcccgggggagccgcctccgacgctgcttgaatatttcccgaaagattttgttactttt
atcgacgagtcccacgtcactgtgccccagatcggggggatgtatcgcggggaccgtgcg
cgcaaaatgaatctggtcgaacacggcttccgtctgccgtcagcgctggacaaccgtcct
ttgaacttccaggagttcgaagccatgatggacaaggttgtctatgtgtcggcgacgccg
ggctcttatgagctgcaaaaatccgaaggggttattgttgagcagatcatccgaccgacc
gggctgattgacccgatcgtggaagttcgtccggtaaaacatcaggtcgatgatctgctg
aaggaaatccgcatccgcgtcagcaagcaagagcgtgtcctgatcacaaccctgaccaaa
cgctcggccgaagatctgaccgagtactatgaaaatctgggcatcaaggttaaatacctg
cacagcgagatcgacaccatggagcgaatggaaatcctgcgcgatttgcgtctgggggtt
ttcgacgttttggtggggatcaacttgttgcgagagggcctggatatccctgaggtcagc
cttgtgggaattaccgatgccgataaagagggcttcctgcgttcagaaagatccctggtg
caaaccatcggtcgtgcggcccgcaacctgaatggccgggtgattctgtacggagacacc
gtcactgaaagtatggaaaaagccatcaatgaaaccgaacgccgccgtcgtatccagagt
gaatacaacgaggcccatggtattacgcctcagtctgtgaaaaaacgcatccgtgatggt
ttgggcgaaatgtttgatggaacagtttccacgccattgggtggtgaaaacaagtccgcc
gccattatgcagaagtttgcgcaacagcccgagaaaatccagcaggagatcaccaaactt
cgtgcccgcatgaaagagctttctgcgaatctcgagtttgaggaagccgcgaagatccgc
gacgaaatcaaacgactgcagattgtggagttgaacgtgcgcagcggggagatcgaacag
gaaagtgcggaggtcgtcaaggatggcctcaagtaa
DBGET
integrated database retrieval system
