Bdellovibrio bacteriovorus 109J: EP01_10635
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Entry
EP01_10635 CDS
T03079
Name
(GenBank) amidase
KO
K21470
L,D-transpeptidase YcbB
Organism
bbac
Bdellovibrio bacteriovorus 109J
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbac01002
]
EP01_10635
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbac01011
]
EP01_10635
Peptidases and inhibitors [BR:
bbac01002
]
Cysteine peptidases
Family C82
EP01_10635
Peptidoglycan biosynthesis and degradation proteins [BR:
bbac01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EP01_10635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
AHZ85391
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All DBs
Position
complement(2220031..2221563)
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AA seq
510 aa
AA seq
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MRVAVSSLVLILFMLVSATASAAVDYSSALSQLSLSEMRQAALGIWKHGLNPKIYWNDRL
ETLYRNGGNLEKTLRPQANQAFLRMLRDLQIGSVDPVNAGRDVKLVRRDFLTPKQFQMIA
LAAGNNAQSFVDLVAPQNAPYIGVQAAIQKIYPHCIDGTWQDIVPVTTPLRLYSIHPVIR
EIKSRLALLGYTMRNMDDRFDGDLLKAVTDIQWNMRIRPDGEISPKGKVWSFLSVSCMDR
VRQIQVDMEKMRWFPQYFEKKYIFVNLAMSYFIMMDQSTDWPRVMSFRTINGRPARKSPT
MRDEIVNVIINPFWVVPPTIFYEDKVNDLKDLTSEQIREYFDSHHYEAWVGGFRRKVDPT
TIDWKGIAAGTVDPDIIIRQLPHLGNALGVLKFDLTNSFAIYLHDTNQRELFDTPMRQLS
SGCVRLEKPLDLAEYLLEDTPWDRQTIASMMARPGEVVAKPTEIPVPSYKRMPVYTAYLT
SMMNSDEVVRFVDDIYGQNPAVLRHLDGRF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtggcagtgtcgtcactggttcttattttatttatgcttgtttccgcgacagca
agcgcagccgtcgactatagctcggcattaagccaactcagtctttcggaaatgcgccag
gccgctttgggaatctggaagcatggtttgaacccgaaaatttactggaatgatcgactg
gagactttgtatcgcaacggggggaatctggaaaagactctgcgccctcaggccaaccag
gcgtttttgcgtatgttgcgtgacctgcaaattggcagtgtcgatccggtgaatgcgggt
cgtgatgtaaagctggtgcgaagggattttttgacgcccaaacagtttcagatgatcgca
ttggcggcgggcaataatgcccaaagctttgtggatctggtggctccgcagaacgctcct
tatataggtgtgcaggcggcgatccagaagatttatccacactgtatcgatggcacctgg
caggacattgtgccggtgacgacacctttgcgattgtattcgattcatccggtgattcgc
gagatcaagagccggctggcgctgttgggatacacgatgaggaacatggatgatcgcttt
gatggcgatctgttgaaggctgtgacagatattcagtggaatatgaggatccgaccggat
ggtgaaatttcgcccaaaggcaaggtctggtctttcctgagtgtgtcttgcatggaccga
gtgcgccagattcaggtggacatggaaaagatgcgctggtttccacagtatttcgagaaa
aagtacatcttcgtgaatctggcgatgtcgtatttcattatgatggatcagtcgaccgac
tggccccgggtgatgagcttccgcaccatcaacggacgcccggcgcgcaagtctccgacg
atgcgggatgaaatcgtcaacgtgatcatcaatccattttgggtggtgccgccgacgatt
ttttatgaggacaaggtcaacgatctgaaggatctgaccagtgagcagattcgggagtac
tttgactcccaccattatgaggcgtgggttggtggcttccgccgcaaggtggatccgacc
acgattgactggaaggggattgcggctggtacggtggacccggatattatcatccggcag
cttccacatctgggaaatgccctgggggtgttgaagtttgatttgaccaacagctttgcg
atttatctgcatgataccaatcagcgcgagttgtttgatacgccgatgcgccagctcagt
tccggttgtgtgcgcctggaaaaaccattggatctggcggaataccttctggaggacact
ccatgggaccgtcagacgatagcttcgatgatggcccggcctggagaggtggtggcaaaa
cccaccgagattccggtgccgtcttacaagcgcatgccggtgtacacggcctatttgacc
tcgatgatgaattcagacgaagtggtgcgctttgtggatgatatctacggacagaacccg
gctgttctgcggcacttggatggacgtttttag
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