Bdellovibrio bacteriovorus 109J: EP01_11385
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Entry
EP01_11385 CDS
T03079
Name
(GenBank) primosomal replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EP01_11385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_11385
Enzymes [BR:
bbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP01_11385
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP01_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_22
TrwB_AAD_bind
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHZ85532
LinkDB
All DBs
Position
2363485..2365530
Genome browser
AA seq
681 aa
AA seq
DB search
MSSTQLWKVAADAPLPEALTYSSDLPLQRGQLVTVPLGRGGRKVHGLILGPTQEVPDFEV
KAVDSIVEEYAPLPEPYVKWLEWLAQYYLHPVGQVVQSAFPPLRKTEKQRASKRPPVIPQ
LEADSALNLTDEQQTCFESIAKFSSFSTHLLFGVTGSGKTEVYLRLLDKVLSEGKRGIVL
VPEISLTPQLIQRFARRFGDKIAALHSQLTDRERTNQWWDIVEGRKSILIGARSALFCPI
DNLGLIIVDEEHEPSFKQDEKLKYNGRDAAVMLGKQMNCPVVLGSATPSLETWKNAVEGK
YHLHRLTRRVANRALPDIEVIDLRKLKSDDEEKQKAITKYSHLPFWLSPDLYERMHQVLD
RGDQAALFLNRRGIAQMVVCPACGHTRECPNCDISLTLHAHSHLICHYCDYHENFKTKCP
DCKEGQLEAIGLGTELLETDLTRLFPGKKIARADRDEIQSRADLEDLIANMESGDIDILV
GTQMIAKGLDFPKLKLVGLVLADVGFNLPDFRATERSFQLITQMSGRSGRHVKDGESPGL
VIIQTFNTEHDSITFAKNHDFEGFATHELEIRSALNYPPMGRLVSFRIQGTKLGQVEETA
RLLARRAQALKTQFPQYGSIEVLGPAEAPLSKLRGQFRYHLLIKTTQPAAANPFSRQLLG
DQDWVPSGVKILIDIDPMSLL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgacgcaactttggaaagttgcggccgacgctcctcttcctgaggcattaact
tacagttcagacctgcccctgcaaagaggccagctggtcactgtgcccttgggccgcggt
ggacgaaaagtccatggcctgattctggggccgacccaggaagttcccgactttgaagtc
aaggctgtggatagcattgtggaagaatacgcccccctgccagagccctatgtgaaatgg
ctggaatggctggcgcagtattatctgcatcccgtgggtcaggttgtgcaatcggctttt
ccgccactgcgaaaaacagaaaagcagcgcgcttccaaaaggccgccggtcattccgcaa
ctggaagcagactcggctctaaacctaacagacgagcagcaaacgtgctttgaaagcatt
gcgaagttttccagcttttcgacccacttgctgtttggcgtgacgggctctggtaaaacc
gaagtgtacctgcgtcttttggacaaggttctttccgaaggcaaacgcggcatcgtgctg
gtgcccgaaatttccctgacaccccagttgattcagcgttttgcgcgtcgattcggcgac
aagatcgcggctttgcattcgcaactgacagatcgcgaacgcaccaaccaatggtgggac
attgtcgagggacgaaaatccattctgattggcgctcgttccgccttgttctgtccgatc
gacaatctgggtctgatcatcgtcgacgaagagcacgagcccagcttcaagcaggatgaa
aaattaaaatacaacggccgcgatgccgccgtcatgctgggtaaacagatgaactgcccg
gtggtgctgggatccgcaacaccaagccttgaaacctggaaaaatgcggtcgaaggaaag
tatcacctgcaccgcctaacccgccgcgtggccaatcgtgctttgccggatattgaagtc
attgatttaagaaaattgaaatccgatgacgaggaaaaacaaaaggccatcaccaagtac
tcacatttgcctttttggctaagccctgacctgtacgaacgcatgcatcaggtgttggac
cgtggggatcaggcggcactattcctgaatcgtcgtgggatcgcccagatggtggtgtgt
cccgcctgtggtcacacccgtgaatgtccgaactgtgatatttcactgaccctgcatgcg
cactcgcatctgatttgtcattactgcgactatcacgaaaatttcaaaaccaaatgtccg
gactgcaaagagggacaactggaagccatcggtcttggcaccgaacttttggaaacggat
ttgacccgcctgttcccgggcaaaaagatcgcccgcgcagaccgcgatgaaattcaaagc
cgggccgatctggaagacctgatcgccaatatggaatccggggatatcgacattctggtc
ggcacccagatgatcgccaaaggtttggatttcccgaagctgaaactggtgggattggtg
ctggcggatgtgggcttcaatctgcctgatttccgcgccaccgaaagaagtttccaactg
atcacacagatgagcggccgcagcggccggcacgtcaaagacggcgaaagcccggggctt
gtgatcattcaaaccttcaacacggaacatgacagcatcacgtttgcaaagaaccatgac
tttgaaggctttgccacgcatgaactggaaatccgctccgcactgaattacccacccatg
ggccgtctggtcagcttccgcattcaaggaactaaactgggacaggttgaggaaaccgcg
agactattggccagaagagcgcaggcgttgaaaactcaattcccgcaatatggctcgatt
gaagtcttgggcccggccgaggctccgctgtcgaaactgcgaggccaattccgatatcat
cttctaattaaaactacgcagcctgcagctgccaatcccttttcaagacagctcttgggc
gaccaggattgggttccttcaggggttaaaatattaatcgatattgatccaatgagtttg
ctttag
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