Bdellovibrio bacteriovorus 109J: EP01_12345
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Entry
EP01_12345 CDS
T03079
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EP01_12345 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbac03021
]
EP01_12345 (rho)
03019 Messenger RNA biogenesis [BR:
bbac03019
]
EP01_12345 (rho)
Transcription machinery [BR:
bbac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EP01_12345 (rho)
Messenger RNA biogenesis [BR:
bbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EP01_12345 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA
ATPase_2
AAA_22
NACHT
Spore_III_AA
S1CSD-TOTE-2
ResIII
GTT3_N
AAA_14
NB-ARC
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
AHZ85722
LinkDB
All DBs
Position
2557416..2558669
Genome browser
AA seq
417 aa
AA seq
DB search
MSSKDLKSKNITQLTELANKLKIENAAGLRRQDMIFEILKRAAKLGQDIYGSGVLEILPD
GYGFLRSPDYNYLPGPDDIYVSPSQIRRFGLRTGDTVTGTVRPPKDGERYFALLKVDSLN
FETTEKGKDKILFDNLTPLYPNERLKLEHNPGEYTTRVVDLMAPLGKGQRALIVAPPRTG
KTVLMQQIANAITHNHPEVKLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEPPTRHVQVA
EMVIEKAKRLVEHKHDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGA
ARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNAEIHLDRKLMEKRIFPCMDINKS
GTRKEDLLVDKADLNRLWILRKVLAPMNVIDAMEFLIDKVEGTKTNNDFLKAMSGPG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctccaaggacttgaaatcaaaaaacatcacgcagctgacagagcttgcgaacaaa
ctgaaaatcgaaaacgctgccggtcttcgccgtcaggacatgatcttcgaaattctgaaa
cgtgccgcgaaactgggtcaggacatttatggttctggcgttctggaaatccttccggac
ggttacggattcttgcgttctccggattacaactatcttccaggtccggatgatatctat
gtatctccgtcccagatccgtcgtttcggcctaagaaccggtgacaccgtgacgggaact
gttcgcccgccgaaagatggcgagcgttactttgcattgttgaaagtggattctctgaac
ttcgagaccactgaaaaaggcaaagacaagatcctgttcgacaacttgacgccgctttat
ccgaatgaacgcctgaagctggaacacaaccctggtgaatacaccacgcgtgttgtggac
ctgatggctccgttgggtaaaggtcagcgtgccttgattgtggcgccaccaagaacaggt
aaaaccgttctgatgcagcaaattgccaatgcgatcacacacaatcatccggaagtgaaa
ttgatcgttcttctgatcgatgaacgtccggaagaggtgaccgacatgcaacgtaccgta
aaaggtgaagttgtttcgtccacgttcgatgagccaccaactcgtcacgttcaggttgcc
gagatggttatcgaaaaagcaaaacgtttggttgaacacaaacatgacgttgtaatcctg
ctggattccatcactcgtctggcgcgtgcctataacaccgttgttcctccatccggtaaa
attctgtctggtggtgtggactccaacgcccttcacaagccaaaacgtttcttcggtgcg
gctcgtaacattgaagaaggcggatctttgactatcatcgcgacggctttgatcgatacg
ggttcccgtatggatgaggttatcttcgaggagttcaaaggtaccggtaatgctgagatc
catttggatcgcaagctgatggaaaaacgtatcttcccttgcatggacatcaacaaatcc
ggcactcgtaaagaggacctgttggttgataaagcagacttgaaccgtctgtggatcctg
agaaaagttttggcgccaatgaacgttatcgacgcgatggaattcctgatcgataaagtt
gaaggcacaaaaacgaacaacgacttcctgaaagcgatgtccggaccgggctaa
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