Bdellovibrio bacteriovorus 109J: EP01_13220
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Entry
EP01_13220 CDS
T03079
Name
(GenBank) excinuclease ABC subunit C
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03030
DNA replication
bbac03430
Mismatch repair
bbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP01_13220
03430 Mismatch repair
EP01_13220
03440 Homologous recombination
EP01_13220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbac03032
]
EP01_13220
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_13220
Enzymes [BR:
bbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP01_13220
DNA replication proteins [BR:
bbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EP01_13220
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EP01_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHZ85888
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All DBs
Position
complement(2736697..2738262)
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AA seq
521 aa
AA seq
DB search
MLLKDLPVFFLDLQTTGAKPGAADILEVAWSLSGHSEVHSVLSAQAEDRPVPRRILALTG
IASEELESATPLSDIFDRLYQDIQDRPAVIHFAQFERPFLTAAFETFKRSEFPIICTHEI
AKRLFPNLPARGIKGLAGYFGHSSGEFKRGASHVEATKIIWQHLVKELEAKGILTFVDMQ
TWLSTEAPKKRTKYEYPMAKEKRLNLPKVPGVYRYVSQWGEILYVGKATSLHDRVNSYFR
GQKGRDSFKLEMLTQAYDLIVTECRTPLESALLETDEIKKYNPRYNISLKAGERGLVFFS
HDFTSMSPEQDDQHSIGPFTNALVFDSILKLNESLLSEDQTFNPEMFFEPLDADLLKSGF
ALFCERLGKSPDVFKSLRSIFAQGLVFVKNAPDEEEDTELAMEEESETSVAASDTAEDIE
IELTAEDIADKFERHFKRAAQAYLRARRMTKLLNCDIEYSLSAKGKKFQLYLRGGHPINE
PAPQERSTWSGHSVETYDRMAVLLTELERVRSKKGQVSIRF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctcttaaaagatcttcctgttttctttttggacttacaaaccacgggggccaaaccc
ggtgccgctgatattctggaggtggcctggtcgctgtcaggccactccgaggttcacagt
gtgctgtcagcccaggccgaagaccgccccgtaccccgtcgcattctggctctgacggga
attgcctctgaagaactggaaagcgcaactccattatctgacatcttcgatcgcctttat
caggatattcaggatcgtccggcggtgattcactttgcccagtttgaaagaccttttctg
acggccgcctttgaaacttttaagcgcagtgaattccccatcatctgcacacatgaaatt
gccaaaagacttttccccaacctgcctgcacggggaatcaagggactggccggatacttt
ggacactcttcaggtgaattcaagcgcggcgccagtcacgtggaagccactaagatcatc
tggcagcacttggtgaaagaacttgaagccaagggcattttgacctttgtggatatgcag
acctggctatccaccgaggccccaaagaagcgcaccaagtatgagtatccaatggccaag
gaaaaacgcctgaacctgccgaaggtgccgggtgtttatcgctatgtctcgcaatggggt
gaaatcctttacgtcggtaaagccacctccctgcatgatcgggtgaatagctatttccga
gggcaaaaaggccgtgactctttcaaactggagatgttgacccaagcctatgacctgatt
gtgacagaatgccggactccgctggagtcggctctgcttgaaaccgacgagatcaaaaaa
tacaaccctcgctacaacatcagcttgaaagccggagaacgcggtttggtgttctttagc
cacgacttcacctcgatgagtccggaacaagatgaccagcacagcatcggtccttttacg
aatgctttggtctttgattccatcctgaagctgaatgaatcattgctttcagaagatcag
accttcaatccagaaatgttctttgaacctttggatgcggatcttttgaaatccggattt
gctcttttctgcgagcgcctgggaaaaagcccggacgtgtttaagtctttaagatccatt
tttgcgcaaggtttggtctttgtgaaaaatgctccggacgaggaagaggacaccgagctt
gcgatggaagaggaatcagaaacttccgtggctgccagtgacacagctgaagacatcgaa
attgaacttactgccgaagacatcgccgataaatttgaacgtcattttaagcgggcggcc
caggcctatttgcgcgcccgtcgtatgacgaagcttttaaactgcgacattgagtattcc
cttagcgccaaaggaaagaagttccagctttacttgcgtggtgggcaccccatcaacgag
cccgccccccaagaacgtagcacctggagcgggcattcggtggagacctatgaccggatg
gccgtgctgctgaccgaactggaacgagtccgcagcaaaaagggccaggtttcaattcgc
ttttaa
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