Bdellovibrio bacteriovorus 109J: EP01_15035
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Entry
EP01_15035 CDS
T03079
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EP01_15035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbac03019
]
EP01_15035
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_15035
Enzymes [BR:
bbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP01_15035
Messenger RNA biogenesis [BR:
bbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EP01_15035
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EP01_15035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHZ86237
LinkDB
All DBs
Position
3097510..3098946
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AA seq
478 aa
AA seq
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MTDLLQLLKANFPFTSFRGEQEQILHKVWANQNLLALMPTGMGKSLCFQFPAKTREGLVV
VISPLIALMQDQVFKAQELGISATFLSSTLSRDERESRQNRLAKGDFKLIYVTPERFRKP
EFLQAIEKRAIQLLAVDEAHCISQWGHDFRPDYSRVGEFRALLGNPPTLALTATATPEVQ
KDILKKLNMEDALIISAGIERPNLALNVHDIYGIDEKIRAIVGLRHLTPGTAIIYCSLIQ
TLKKVSSALNRLGMAHRVYHGDLPPQDRKRNQKAFQTEEAPLMIATPAFGLGIDKSNVRL
LIHAETPNSLESYFQEVGRAGRDGAESSCHLLYDQDDVSIQMEFLKWSHPEPDFIRKIYQ
LIEDKRMQVDQGGFDFLREQMNFRNRRDFRSEAAVSILERWGCLQKSDDPFPFACVQAPT
DEQFLAENGEAILRAQNTKLLQMVQWANQDSECRMNRIYAYFGHEHTEPCGKCDICKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcttcttcagcttttaaaagcgaactttccttttacttctttccggggcgag
caggagcaaatcctgcataaagtttgggcaaatcagaacctactggctttaatgcccacg
ggaatgggaaaaagcctctgctttcagtttccagcaaagacccgcgagggcctggtggtc
gtcatatcgccgctaatcgctttgatgcaggatcaggttttcaaggcccaggagctgggg
atcagtgccacgttcttaagttccactttgagccgggacgaacgcgagtcccgccagaac
cgcctggccaaaggcgacttcaagctgatctatgtgaccccggaacgcttccgtaaacct
gagtttcttcaggctattgaaaaacgggccattcaacttttggccgtggacgaggctcac
tgtatttcccaatgggggcatgacttccgcccggattattcccgggtcggagagttccgc
gcccttttgggcaatccgccgactttggcgctgacggccacggcgacgcccgaggttcaa
aaagacatcctgaaaaaactgaatatggaagacgccctgatcatttccgcggggattgag
cgcccgaacctggccctgaatgttcacgacatctatggaatcgatgaaaagatccgggcc
atcgtggggcttcgtcatctgacaccaggaacggcgatcatttattgctctttgattcag
acgctgaagaaagtttcgtctgcgttgaaccgactgggcatggcgcatcgggtgtatcac
ggcgatttgccgccgcaggatcgcaagcgcaatcagaaagccttccagactgaagaagct
ccgctgatgatcgcgacgcccgctttcgggttgggcatcgataaaagcaacgtgcgcctg
ttgattcatgccgaaaccccgaactctttggaatcctattttcaggaggtcggtcgtgcc
ggtcgagacggggccgagtcatcttgtcatctgctgtatgaccaggacgatgtcagcatt
cagatggagtttttgaaatggtctcaccccgagcctgatttcatccgcaaaatctatcaa
ctgatagaagacaaaagaatgcaggtggatcagggtggatttgacttccttcgtgaacaa
atgaattttagaaatcgccgggacttccggtccgaagccgcagtcagtattctggaacgc
tggggatgtctgcaaaagtccgacgatccgtttccctttgcttgcgtgcaggcaccaacg
gacgagcagttcctggcggaaaacggcgaagctattttgcgcgctcagaacaccaaactt
ttgcagatggtgcagtgggcgaatcaggacagcgagtgccgcatgaatcgcatctatgct
tactttgggcatgaacacactgaaccgtgtgggaaatgcgatatctgcaaacgatag
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