Bdellovibrio bacteriovorus 109J: EP01_18235
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Entry
EP01_18235 CDS
T03079
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac03030
DNA replication
bbac03410
Base excision repair
bbac03420
Nucleotide excision repair
bbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP01_18235
03410 Base excision repair
EP01_18235
03420 Nucleotide excision repair
EP01_18235
03440 Homologous recombination
EP01_18235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbac03032
]
EP01_18235
03400 DNA repair and recombination proteins [BR:
bbac03400
]
EP01_18235
Enzymes [BR:
bbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP01_18235
DNA replication proteins [BR:
bbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EP01_18235
DNA repair and recombination proteins [BR:
bbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EP01_18235
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP01_18235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
KASH_CCD
Motif
Other DBs
NCBI-ProteinID:
AHZ86858
LinkDB
All DBs
Position
3760925..3763516
Genome browser
AA seq
863 aa
AA seq
DB search
MKKIYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYDRK
EPSFRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKWS
RRNGMEVFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVGD
ASDNVPGVKGVGEKGAIKLLEQFKHVEDIYENIDKVESKSVREKLIASKDNALLSKKLVT
ISCDVPMPDDLEAYKLKPFKADELRAFLHELNFKSFEKSLFGTVDTTPAAAAPAAPAGPL
IKTAAPSAPLSIADDVAPTIVIAKEERQFTEKSMTTRELADFLAEHQSLWGFSDMRGVFI
GTESQIIQVPDHEYLGKLTDTFQVQWHGYDLKSFWHKIGAKTPVAAWDSQLAAYVLKAGD
TSDFAKIYTRFMADVLPDLASPSQLYNAQLNFATTLKSQLQTVQGEKVYQELDLPLARVL
LSMERLGVRIDKDLLAKQSEELAKDIAEIEKQIHEAAGESFNVGSPKQLGVILFEKLGLP
AGKKTKTGYSTDEEVLLGLEHPIAKLVLQWREMSKLKSTYVDALPTMIDPKDERVHTSFN
QALTTTGRLSSTQPNLQNIPIRTARGQQVRKAFIAAPRMKLLSVDYSQIELRILAHISED
PNLCKAFAEDLDIHAATAAEVFGVPLKDVTAEHRRSAKAVNFGIAYGQGAFGLAENLGIS
RTEAKDIIERYFNRFKNVREYIDGTIKMAHEKGYVETLFGRRRYIDELQSKNMALKKFGE
RAAINAPIQGTASDLVKKAMIEVFEKVPVRMLLQVHDELIFEDFEENLQKHSPQLVSIME
NVMKLKVPLKVNYAIGNNWDEAH
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatctaccttattgacgtcagtgccatgttctttcgcgccttctacgcgatt
cgtgccctttcgtctccaagcggagttccggttaacgccgtttacggcttcctttccatg
atgatcaaacttctgaaagaggaaaaacccgagtatctggttttctgctatgaccgcaaa
gaaccctctttccgaaaaaccatgtacgatggctacaaagctcaccgtaccgagatgccg
gacgaactggcccaacaaatcccttatatcaaaagactggcagacctgctgggcgttccc
gcatttgaagtcgaatccttcgaggccgatgacatcatcgggacattgactaaatggagc
cgtcgcaatggcatggaagtgttcattgtcagcggcgataaagacttcggccagctgatc
gaagacggcgtcacgctgtacgacacgatgaagggtgttcgctacaacgccgaaggtgtc
tttgaaaagtggggtgtgcgcccggatcagtttatcgactatctggcgattgtgggggat
gcttcggacaacgttccgggcgtaaagggtgtcggggaaaaaggcgccatcaagcttttg
gagcagttcaaacacgtcgaagacatctatgaaaatatcgacaaagttgaaagcaaaagt
gttcgtgaaaagctgattgcctccaaagacaatgcactactgtccaaaaagctggtgact
atttcctgtgacgtaccgatgccggatgaccttgaggcctacaaactcaagccgttcaag
gcggacgaactgcgtgccttcctgcatgagctgaattttaaatccttcgaaaaaagtctg
tttggaacagtggacacgactccggcagcggcggcaccagcggctccggccggtccgttg
atcaagacggcagcaccctccgcgccattgagtattgccgatgatgtcgcgccgaccatc
gtgattgccaaagaagagcgtcagttcactgaaaaaagcatgacaacccgtgaactagcc
gacttcctggcggaacaccaaagcctttggggctttagcgacatgcgtggagtcttcatc
ggaactgagtcccagatcatccaggtccctgatcatgaatatctggggaagttgaccgac
actttccaagttcaatggcatggctatgacctgaagtccttctggcacaagatcggagcg
aaaactcctgtggcggcctgggattcccagttggcggcttatgtgttgaaggccggtgac
acctccgattttgccaagatctacactcgctttatggccgatgtgttgccggatttggca
tcaccatcgcagctgtacaatgctcaattgaattttgccacaaccctgaaatcccagttg
cagaccgtgcagggtgaaaaggtttatcaggaactggatcttccattggcgcgtgtgctt
ttgtccatggagcgtctgggggttcgcatcgacaaggatcttttggccaaacaaagtgaa
gagctggcgaaagacatcgcagaaatcgaaaaacaaatccacgaagcggcaggggagtcc
tttaacgtcggaagcccgaaacagctgggcgtgattctgtttgaaaaactgggcctgcct
gccgggaaaaaaacaaaaaccggctattccacagacgaagaagtgctgttgggtctggag
catccgattgcaaaactggttttgcaatggcgtgagatgtccaagctgaagtccacttac
gtcgatgccttgccaaccatgattgatcctaaagacgagcgcgtgcacacgagctttaat
caggccctgaccaccacgggccgtctttccagcacgcagccgaatttgcagaatattcca
attcgtaccgcgcgcggccagcaggtgcgcaaggcgttcatcgcggctccgcgcatgaag
cttttgtcggtggactattcccagatcgaattacgtattctggcgcatatttccgaagac
ccgaacttgtgcaaagcctttgctgaagacctcgacattcacgcggccaccgcagcggaa
gtgtttggggtgcctttgaaagatgtgactgctgaacaccgtcgttctgcgaaggccgtg
aactttggaattgcttacggtcagggggccttcggtctggcggaaaacctgggtatttca
cgcaccgaagccaaggatattatcgagcgctatttcaaccgctttaaaaacgtccgcgag
tatatcgatggcaccatcaagatggctcacgaaaaaggctatgttgaaacgctgtttgga
cgccgccgttatatcgacgagcttcagtccaagaacatggctttaaaaaagttcggcgag
cgcgccgcgatcaacgccccgattcaggggactgccagtgatctggtgaaaaaggcgatg
atcgaagtgtttgaaaaagtgccggtgcgcatgctgttgcaggtgcacgatgaattgatc
ttcgaggatttcgaggagaatctgcagaagcactcccctcagttggtttcaatcatggaa
aacgtgatgaagctgaaagtgccgttgaaggtcaattatgcgatcgggaacaactgggac
gaagctcactag
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