Bdellovibrio bacteriovorus 109J: EP01_18445
Help
Entry
EP01_18445 CDS
T03079
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbac
Bdellovibrio bacteriovorus 109J
Pathway
bbac02020
Two-component system
bbac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EP01_18445
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EP01_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbac03021
]
EP01_18445
Transcription machinery [BR:
bbac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EP01_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
CHDCT2
Motif
Other DBs
NCBI-ProteinID:
AHZ86897
LinkDB
All DBs
Position
3801353..3802795
Genome browser
AA seq
480 aa
AA seq
DB search
MLMALRQTMNLSQSLVITPQLQQAIKLLQMSRMELESAVRSELEENPILEEAESALKEED
LQRTKEAANEVEHSETPDQQNIQDPQKQDEFEWESYIEANQKPPQSGMAGSEEIMNYENV
ITASQTLHDHLYWQVKMNGFSEEEERAADALIGAIDDDGYIKVPLEQIAEEEKVDLALLE
DTLTLIHEFDPPGVGARDLQECLLIQAKHMEEDTHDLVTLIKNHVKDLEKKNYEAIAKAL
NRDVEDIVEICKIIYAMDPKPGRAFVSSDTHYVTPDVYVYKVGDDYVVSLNEDGLPRLKI
SNFYKNMLKGGKTTGDKTQDYIQEKLRSAVWLIKSIHQRQRTIYKVTESIVKHQREFFEK
GSEHLKPMVLRDIANDIGMHESTVSRVTTAKYVHTPQGIYELKYFFNSGISSSDGDSLAS
ESVKIKIKDLVAKEDPKNPLSDQKIVDLLKVEGIQIARRTVAKYRDVLKILPSSQRKKYF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
attttaatggctcttcgacagacgatgaacctgagccagtctctggtaatcactccacag
ctgcaacaggcgatcaagcttttgcagatgtcgcgtatggagttggagtcggctgtgcgc
tccgagctggaagaaaatcctattctggaagaagccgaatccgcgctgaaagaagaagac
cttcaaagaaccaaagaggctgccaacgaagttgagcattccgaaactccggaccagcag
aacattcaggatccgcaaaagcaggatgaattcgagtgggaatcctacatcgaagccaac
caaaagcctccacagtccggcatggcgggttctgaagagatcatgaactatgagaacgtc
atcacggcgtctcaaaccctgcacgatcacctttactggcaagttaaaatgaacggcttc
tctgaagaagaggaaagagccgcagacgccctgatcggcgccattgatgatgacgggtat
atcaaagttcctctggagcagatcgctgaagaggaaaaagtggatctggccctgctggaa
gacactctgaccctgattcacgaatttgatcccccgggtgtgggtgcccgcgatctgcag
gaatgtctgctgatccaggccaaacacatggaagaggacacccacgatctggtcacgctg
atcaaaaatcatgtgaaggatctggaaaagaaaaactacgaggccatcgccaaagccctg
aaccgcgacgttgaagacatcgtggaaatctgcaaaatcatctatgcgatggatccaaag
ccgggtcgtgcgtttgtcagcagtgacacgcactatgtgactccggatgtttacgtttac
aaagtcggtgatgattacgtggtgtctttgaatgaagacggtttgccgcgtttgaaaatc
tccaacttctataaaaacatgcttaaaggtggcaaaaccaccggcgacaagacccaggat
tatatccaggaaaaacttcgttctgccgtttggttgatcaagtccattcaccaaagacag
cgcacgatctacaaggtgactgagtcgatcgtaaaacaccagcgcgagttctttgaaaaa
ggctctgagcacttaaaaccgatggttctgcgtgatatcgccaatgatatcggcatgcac
gaatccacggtcagccgtgtgaccacggcgaaatacgtgcacacaccacagggtatctac
gaactgaaatacttcttcaattccggtatcagctcttcggatggtgattcactggcttcc
gagtcagttaaaatcaaaatcaaggatctggtggccaaggaagatccgaaaaatccattg
tccgatcaaaagatcgtggatttgctgaaggtcgaaggtattcagatcgcacgtcgtacg
gtggccaaataccgcgacgttcttaagattcttccttcttctcaacgtaagaagtacttc
tag
DBGET
integrated database retrieval system
