Pseudobacillus badius: K7T73_01745
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Entry
K7T73_01745 CDS
T07942
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbad
Pseudobacillus badius
Pathway
bbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7T73_01745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbad03019
]
K7T73_01745
03009 Ribosome biogenesis [BR:
bbad03009
]
K7T73_01745
Enzymes [BR:
bbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K7T73_01745
Messenger RNA biogenesis [BR:
bbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7T73_01745
Ribosome biogenesis [BR:
bbad03009
]
Prokaryotic type
rRNA helicases
K7T73_01745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Phage_holin_10
DUF4422
Motif
Other DBs
NCBI-ProteinID:
UAT31033
LinkDB
All DBs
Position
322343..323806
Genome browser
AA seq
487 aa
AA seq
DB search
MTKFKDLNLSETTLKAIDKMGFEEATPIQAQTIPAGLEGHDIIGQAQTGTGKTTAFGVPM
IEKIDTNNHLIQGLVIAPTRELAIQVSEELYKIGSGKRVGILAVYGGQDIQRQIRALKKR
PHIIVGTPGRILDHINRKTLKLDHLQTLVLDEADEMLNMGFIQDIEAILSHMPVERQTLL
FSATMPKQIRAIAERFMKDPVSIRVKAKEMTVSNIEQHYVKVHQRDKFDVLSRLIDVHSP
ELAIIFGRTKRRVDELANALSLRGYQAEGIHGDLTQAKRLTVLKRFKEGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGVAITFVEPREMGYLKEVEKTTK
KKMSPMAAPTWDDALVGQQQAAVNELEESVAKNDLSQYKALAKGLLDQYDAEQIVAAALK
LITKEPDRTPIHITSEASLPQKKDKFRSKNSSSKKPYGSRQGGRSSGGNRSYNRDRKSNP
RRKYTSQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaatttaaagatctaaatttaagtgaaaccactttaaaagctattgataaaatg
ggatttgaagaggcgacgcctattcaggctcaaacgattccggctggccttgaaggtcat
gacattattgggcaggcgcaaacaggaacaggtaaaacgacagctttcggcgtaccaatg
attgaaaaaattgatactaacaaccatctgattcagggcttggttattgctccaacccgg
gagctggccattcaggtatctgaagagctttataaaattggcagcggcaagcgcgttggt
attttggctgtatacggcggccaggatattcaacgccaaattcgcgcactgaaaaagcgt
cctcatattattgtagggacaccaggccggattcttgaccatattaaccgaaaaacactg
aagcttgatcatttgcaaacgcttgtgctggatgaagcggatgaaatgctgaatatggga
tttattcaggatatcgaggctattctttcccacatgccagttgaacgccaaactttgttg
ttctcagcaacgatgcctaagcaaattcgggcgatagctgagaggtttatgaaggatcct
gtaagcattcgtgtgaaagcaaaagaaatgacggtttctaacattgaacagcattatgtg
aaagtgcatcagcgcgataaattcgatgtgctctcccgcttaattgatgttcactcgcca
gaattggctattattttcggccgtaccaaaagacgtgtcgatgaactggctaatgcatta
agcctccgcggctatcaggcagaaggaattcacggcgatttaactcaggcgaaacgctta
acagtgctaaaacgcttcaaagaaggaaaaatcgacgttcttgtggcaacagacgtagct
gcacgcggccttgatatttccggggtcactcatgtatacaactatgacatcccgcaagat
ccggaaagctatgttcaccggattggccgtacgggccgtgccggcaaagagggcgttgcg
attacatttgttgaaccaagagaaatgggctatttaaaagaggtcgaaaaaacaacgaag
aaaaagatgtcgccaatggctgctcctacatgggatgatgcattggttggccagcaacag
gcagctgtcaatgagctggaagaatctgttgccaaaaacgacctttcccaatataaagca
ttggcaaaaggactgcttgatcagtatgatgctgaacagatcgttgctgctgctttaaaa
ttgattacgaaggaaccagatcggacaccgatccatatcacgagtgaagcttctcttccg
caaaagaaagataagttccgctctaaaaattcaagttccaaaaagccgtatggcagccgt
caaggcggacgttcatccggtggcaaccgctcatataaccgtgatcgcaaaagcaatcca
agaagaaaatatacttctcaataa
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