Pseudobacillus badius: K7T73_02830
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Entry
K7T73_02830 CDS
T07942
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbad
Pseudobacillus badius
Pathway
bbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7T73_02830 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbad03019
]
K7T73_02830 (recQ)
03400 DNA repair and recombination proteins [BR:
bbad03400
]
K7T73_02830 (recQ)
Enzymes [BR:
bbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K7T73_02830 (recQ)
Messenger RNA biogenesis [BR:
bbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7T73_02830 (recQ)
DNA repair and recombination proteins [BR:
bbad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K7T73_02830 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UAT31206
LinkDB
All DBs
Position
546516..548660
Genome browser
AA seq
714 aa
AA seq
DB search
MLQQARQLLQSYFGYSAFRSGQEQAISQVLEGENTICVMPTGGGKSICYQIPALVLPGMT
VVISPLISLMKDQVDTLLEAGVPAAYINSSLSAVEVRETMEAARQGEYKLLYIAPERLES
SAFIEELKEMPIPLVAVDEAHCISQWGHDFRPSYRQIQRFTENLPQHPVVLALTATATPK
VREDICRLLKIDESNTVITGFERENLSFSVVQGQDRFAFIKEYLAKNGKEAGIIYAATRK
AVDQLYDKLKRSNMAVSRYHAGMSDEERASEQERFLTDQSAVMIATNAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLASECILLYSPQDVQTQRFLIDQSLERERIPRELEK
LQLMIDYCHTESCLQSYIIKYFGDEALEPCGRCSNCTDSRAVVDVTKEAQMVLSCVIRMG
QRYGKSITAQVLTGSKNKKVAEFGFHTLSTYGIMKEKSAKDVTNFIDFLISQELIGVGHG
TYPIIFVTSKGKEVLLGEQQVARKEAVQTKQIAADDPLFEELRSLRKTLADEAGVPPFVI
FSDRTLKDMCLRLPQTEEEFLAVSGVGRNKFEKYGPAFIEMIAAFCEEHPERERDSMTVL
APAVPKKKALGQSHLETYELHQQQFTTFEIAEKRELAVSTIENHLLQCAEEGKDIELSLI
VPESDWPLLEEAIEEEGREQLKPIKERVPEKITYGMIKAFLTIGLPENAGAKEK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgctccaacaagcgcggcaattattacaatcatactttggctattctgcttttcgcagc
gggcaggagcaggcaattagccaggtgcttgaaggggagaataccatttgtgtcatgccg
acgggcggcggaaaatccatttgttatcaaattccggctcttgttctcccggggatgacc
gtcgttatttcgccattgatttctcttatgaaggatcaagtcgatacgctgctggaagcg
ggcgtgccggctgcttatattaatagctcactgagtgctgtggaggtgcgagagacgatg
gaagcagcgcgtcagggcgaatataagctgctttatattgctcctgagcggctggagtca
tctgcttttatagaagagctgaaagaaatgccaatcccgcttgtagcagtagatgaagcg
cactgtatctcgcagtggggccatgattttcggccaagctaccggcaaatccagcggttt
acggaaaatctgccgcaacaccctgttgtgctcgctttaactgctacggctactccgaaa
gtgcgtgaagatatttgccggcttctaaagattgatgaatcgaatacagtcattacagga
tttgaacgggaaaatttgtctttctctgttgttcaaggacaagaccgcttcgcttttatt
aaagagtatctggcgaaaaacggaaaggaagcagggattatttatgcggcgacaagaaaa
gcggtggaccagctatatgataagctgaagaggagcaatatggccgtttcccggtatcat
gcaggcatgagcgacgaagaacgggccagcgagcaggagcgctttttaacggaccaatcg
gcggtgatgatcgcgacgaacgctttcgggatggggattgataagtccaatatccgctat
gtcattcactatcagcttcctaaaaatatggaaagctattatcaggaagcaggaagagcg
ggcagggacggcttagctagcgaatgtattcttctttattcgccgcaggatgttcagaca
cagcgctttttaattgatcagtctcttgaaagagaacggattcccagggagcttgaaaag
ctgcagctgatgattgactactgccatacagaaagctgtttgcaaagctatatcattaaa
tacttcggtgacgaagcgttggaaccatgcggccgctgcagcaattgcaccgactcccgc
gctgtagtcgatgtaacaaaggaagcgcaaatggtgctgtcctgtgttattcgaatgggc
cagcgctatggaaagtcgattactgcccaagtattaacagggtccaaaaataaaaaggtt
gctgagtttggctttcacacgctttcaacctatggaattatgaaggaaaaaagtgccaag
gatgtgacgaactttattgattttttaatctcacaggagctgattggcgttgggcatggc
acatatccgatcatttttgtgacgagcaaaggcaaagaagtattgctcggggaacagcag
gtcgccagaaaagaagcggtgcaaacaaaacagattgctgccgatgatccgctgtttgaa
gagctgcgcagcttaagaaaaacccttgcggatgaagctggtgttccgccgtttgtgatt
ttttcagaccgcacgctgaaggatatgtgcttaaggctgccgcagacggaggaagagttt
cttgctgtgagcggtgtcggaagaaataagtttgagaagtatggaccagctttcatcgaa
atgattgcggccttttgtgaggagcacccggaaagggaaagagacagcatgacggtgctg
gctccggcggttccaaagaaaaaggcgctagggcaatcgcatttagaaacatacgagctg
catcaacagcagttcactacttttgagatcgctgaaaagcgggagcttgccgttagtacc
attgaaaatcatttattgcagtgtgctgaggaaggaaaagacatagagctgtctttaatt
gtgcctgaaagcgattggccgctcttggaggaagcaatagaagaggaaggcagagagcag
ttaaagccaattaaagagcgggtgccagaaaagattacgtacggcatgattaaggctttc
ttgacgataggccttccggaaaatgccggtgctaaagagaaataa
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