Pseudobacillus badius: K7T73_06165
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Entry
K7T73_06165 CDS
T07942
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbad
Pseudobacillus badius
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbad03032
]
K7T73_06165 (topA)
03400 DNA repair and recombination proteins [BR:
bbad03400
]
K7T73_06165 (topA)
Enzymes [BR:
bbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K7T73_06165 (topA)
DNA replication proteins [BR:
bbad03032
]
Prokaryotic type
DNA Topoisomerases
K7T73_06165 (topA)
DNA repair and recombination proteins [BR:
bbad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K7T73_06165 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
UAT31805
LinkDB
All DBs
Position
1223184..1225262
Genome browser
AA seq
692 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIENSYEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDLDTSSDCRVVFNEITKDAIKE
SFKHPRPINMNLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EISLFKPEEYWTIEAQFSKGATSFSASFYGKNGKKTALKSEEEVKATLAAIKGNSFEIAS
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEIAQKEAREFIESTHGKEYTRATEAKKEKKSSKAQDAHEAIRPTSVLKEPGML
KEFLSRDQLRLYKLIWERFLASQMSSAVIDTVSADLVNGDITFRATGSKVKFQGFMKVYI
EGSDDGQEEKEKQLPNLEKGDTAISENIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
FAPTLDTIQKRGYVSLDNKRFVPTELGEIVHELMKEFFSDIIDVEFTAKMEKDLDHVEDG
QVEWAEVIDEFYRGFEQHLVKAEEEMEKVEIKDEPAGEDCENCGSPMVFKMGRYGKFMAC
SNFPDCRNTKAIVKEIGVKCPRCNEGNIIERKSKKRRIFYGCDRFPECDFLSWDKPIERK
CPKCEQMLVEKKLKKGVQIQCTGCDYKEETQV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtacttagtaatagtcgagtcccctgcaaaagcgaaaactattgaacgttat
ttggggaaaaaatataaagtgaaagcatccatgggccatgtgcgcgatctgcctaaaagt
cagatgggtgtggatatagaaaatagctatgagccgaaatacattacgatccgcggaaaa
gggccggtgctgaaagagttgaaaacggctgctaaaaaggcgaaaaaaatttacttggca
gctgaccccgacagagaaggggaagccattgcctggcatttggcccacagcctggactta
gatacctcatcagactgccgcgtagtgtttaatgaaattacaaaagatgctattaaagaa
tcgtttaaacatccgcggcccattaatatgaaccttgtggatgcccaacaggcgcgccgc
attcttgacagactagtcggttataacattagtccgcttctttggaagaaagtgaaaaaa
ggattgagtgcaggacgggttcaatcggttgccctgcggctgattattgaccgcgagaaa
gaaatcagcctcttcaagccagaagaatactggacgattgaagcccagttttcaaaagga
gctacttcattttctgcttctttctatggaaaaaatggaaagaaaacggcactgaagtca
gaagaagaagtcaaagcaacgcttgccgctatcaaaggcaacagctttgagattgcaagt
gtgactaaaaaagaacgcaaaagaaaccctgcgcctccgtttacaacctcttccttgcag
caggaagcggcccgcaagctgaacttccgggcaaagaaaacgatgatgctggctcagcaa
ttatacgagggaatcgacttaggcaaagaaggaacagtcggtctcattacttacatgaga
acggattctacaagaatatccgaaattgcccaaaaagaagcccgtgagtttattgaatca
acacatggcaaagaatatacaagagcaacagaagcaaaaaaagaaaaaaaatcatccaag
gcacaagatgcgcatgaagccattcggccgacgagtgtgctgaaagagccgggcatgctg
aaggagtttctgtcccgcgaccagctgcggctatacaaattaatatgggaacgcttcctt
gccagccaaatgtcatcagctgtcattgatacagtcagcgctgaccttgtaaacggtgac
attaccttccgggccactggttcaaaggtaaaattccagggatttatgaaagtatatata
gaaggatctgatgacggccaagaggaaaaagagaagcagttgcctaacctcgaaaaaggc
gatacagctatttctgaaaatatagagccgaaacagcattttacacagccgccgccccgc
tatacggaagcccggttggtgaaaactttagaagaacttggaattggcaggccatctacc
ttcgctcctacgcttgatacgattcaaaagcgcggctatgtgtctcttgacaataaaagg
tttgtgccgactgagttaggcgagattgtccatgaactgatgaaggaatttttctcggat
attatcgacgtggaatttacggcaaaaatggaaaaggatttggaccatgttgaggatgga
caagtagaatgggcagaagtcatcgatgaattttatcgcggttttgaacagcatttagtc
aaggcagaagaagaaatggagaaagtggaaattaaagatgagccggccggggaagattgc
gaaaactgcggcagcccaatggtctttaaaatgggccgctacggaaaattcatggcttgc
agcaatttccctgattgccgaaatacaaaagcaattgtaaaagaaatcggagtgaaatgc
ccaagatgcaacgaaggaaatataatagaaagaaaaagtaagaaacggcggattttttat
ggatgtgaccgctttccggaatgtgactttttatcttgggataaaccaattgaacgaaag
tgtccaaaatgtgaacagatgctcgttgaaaagaaattgaaaaaaggcgtacaaattcaa
tgtacaggatgcgattacaaagaagagacacaagtataa
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