Bacillus badius: K7T73_06590
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Entry
K7T73_06590 CDS
T07942
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bbad
Bacillus badius
Pathway
bbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7T73_06590 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbad03019
]
K7T73_06590 (rny)
Messenger RNA biogenesis [BR:
bbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K7T73_06590 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
MctB
DUF5518
Motif
Other DBs
NCBI-ProteinID:
UAT31888
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Position
1312815..1314374
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AA seq
519 aa
AA seq
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MEPITIISILLGLIVGVVVGYFVRKSIAESKIAGAKSAADQIVDDAKREAESLKKEALLE
AKDEIHKLRTDTELELRERRNELQKQENRLLQKEENLDRKDDSLDKRESQLEKKEEILAE
RQQHIEEMDSKVEEMIKKQQAELERIASLTREEARSIILERTEQELAHDIAVMTKEQENR
AKEEADKKAKSILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETAKIALEKLVQDGRIHPARIEEMVDKARREVDEHIRE
VGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAFLTGLLAAELGEDETLA
RRAGLLHDIGKAVDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRIIVKPEQVDD
LQAHRLARDIRKRIEGELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaacccattacaatcatctccattttgcttggcctaatcgtcggtgtagttgttggc
tattttgttcgaaaatccattgccgaatctaagattgcaggagctaaaagcgctgccgac
caaattgttgacgacgcaaagcgtgaggcggaatccttaaagaaggaagccctgcttgaa
gcaaaggatgaaattcataagcttcgtacagacacggaattagaacttcgtgaacgaaga
aacgaattgcaaaaacaagagaatcgtttgctacaaaaagaagaaaacctcgaccgaaaa
gatgattcgcttgataagcgcgaatcgcagcttgagaaaaaagaggagattcttgctgag
agacaacaacatattgaagagatggacagcaaagtggaagagatgatcaaaaagcagcag
gcggaattagaacgaatcgccagtcttactcgggaagaggcccgctcgattatcttggag
cggacagagcaagagcttgcacatgatattgctgtaatgactaaagagcaagagaaccga
gcaaaggaagaggcagataagaaagcaaaatcaatcctttctcttgccattcagcgctgt
gcggcagatcatgtggcggaaacaacggtctctgttgtgacattgccaaatgatgaaatg
aaaggccgtatcatcggacgggaaggacggaatatccgaacgctcgaaacgctgacaggt
attgatttgattattgatgatacaccggaagcggttatcctttcgggatttgacccgatt
cgccgggaaactgctaagattgcccttgaaaagctggtccaagatggacgtatccatcca
gcgcgcattgaagaaatggttgataaagcgcggagagaggtagatgagcatatccgggag
gtcggagaacaaacgacctttgaggtaggtgttcacggtttgcatccggacttgatcaaa
attcttggacgattgaaatatcgtacaagctacggtcagaatgtgttaaagcactcgatg
gaagtggcctttcttactggcctgctggcagcggagcttggagaggatgaaactctggcc
cggcgtgctggattgcttcatgatatcggcaaagctgtcgatcacgaagtggaaggaagc
catgtagagatcggcgtagagcttgcgacaaagtataaagagcatccggttgttattaat
agcattgcttctcaccatggagacactgagccaacttctattattgctgtactcgtggct
gctgctgatgctctatcagctgctagaccaggtgcccgcagtgaaacgctggagaattat
attcgccgcctggaaaaacttgaggaaatttccgaatcatatgatggcgtagagaagtcg
ttcgctatccaggctggtcgtgaagtgcggattatcgtaaaaccagaacaggtggacgat
ctgcaagcacaccgacttgcgcgtgatatccggaaacgaatcgagggagagcttgattat
ccaggtcatattaaagtaacagttataagagaaacgcgtgctgtggaatatgcaaaataa
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