Pseudobacillus badius: K7T73_15025
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Entry
K7T73_15025 CDS
T07942
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bbad
Pseudobacillus badius
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbad03016
]
K7T73_15025 (thpR)
Enzymes [BR:
bbad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K7T73_15025 (thpR)
Transfer RNA biogenesis [BR:
bbad03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K7T73_15025 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
UAT29884
LinkDB
All DBs
Position
complement(2889563..2890117)
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AA seq
184 aa
AA seq
DB search
MSQNHYFFALPLPNELKQSLHQCIQKQQLPFARFVHEQDLHLTLAFLGSADEEQLQAARS
LVASSVQEMEAFPLVINSLGVFGKKTEPRIFWAGIKEEQRLDTLQSAVSSACREAGFSID
NRPFRPHITLARKWKGESLFQLPQLEVNQKFLAETVVLYETYLDKSPKYKVKQIIQLHTG
KGKE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatcattatttcttcgcccttcctttgccgaatgaattaaaacaatcactg
catcagtgcattcaaaaacaacagcttccatttgcaaggtttgtgcatgagcaggatttg
catcttacgctggcgtttttgggatcagccgacgaagagcagctgcaagcagctcgttcg
cttgttgcttcgtcagtacaggaaatggaagcttttccgcttgttatcaattctcttggc
gttttcggaaaaaagaccgagccgcgtattttttgggcagggataaaggaggaacagcgg
ctggatacattgcaatcagctgtcagctctgcctgccgggaagccggattcagcatcgat
aacagaccatttcgtccacacatcacactagctagaaaatggaagggtgaatcgctcttt
caactcccgcagttagaggtcaatcaaaaatttttagcagaaactgtcgttttatacgaa
acttatttggataagagtccgaaatataaagtaaagcaaataattcaattacatacaggt
aagggaaaggaataa
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