Bacillus badius: K7T73_17095
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Entry
K7T73_17095 CDS
T07942
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbad
Bacillus badius
Pathway
bbad02020
Two-component system
bbad02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K7T73_17095 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K7T73_17095 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbad03021
]
K7T73_17095 (rpoN)
Transcription machinery [BR:
bbad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K7T73_17095 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_23
HTH_11
HTH_3
Sigma70_r4
Sigma70_r4_2
MarR_2
GerE
MarR
HTH_IclR
SF3b1
HTH_5
HTH_38
HTH_Tnp_ISL3
HTH_20
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UAT32697
LinkDB
All DBs
Position
complement(3270828..3272156)
Genome browser
AA seq
442 aa
AA seq
DB search
MHLKPGLWQQQTMKLAMTQELTQAIALLQYSAQELTEFLEAKTMENPFIQLEVSEMKALQ
PKEKAGVRKGRLEKKDDKNWVEHLADHSQTLTDYLRMQLSLVPLNNEQKRILDFLLYNMD
ENGYMSITVEETAGMCGCREETAAEVLQLIRELEPAGVGAENLQDCLLLQLERMEGVPPL
VPVIIQDYFIAFAEKNWRLVAKKLGVDVKAIQEAADFIQKLNPKPGARFHYEQPTYVRPD
LTVVLKNDSIEVHLLEDEMPKIVFQKDYFEELASHKDEQLKEFMKDKHKDYLWLLKSLEQ
RKRTIQRVGLKIVEKQKDFFFYGPSRLQPLTMKEIADELEIHESTVSRAVRGKYMQTPYG
TYELKTFFPAGLSGGTEETASAAQVKSKITELVNGESKTKPLSDQEISNLLKEEGWQVSR
RTVAKYRDQLFIPSSSKRKRYD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaaagcccggactttggcagcagcaaacgatgaaactcgcgatgacccaggaa
ttgacacaagcaattgctttgctgcaatactctgcccaggagttaacagaatttctagaa
gcaaagacaatggagaatccatttattcaattagaggtatcagaaatgaaagcgcttcag
ccgaaggaaaaagcgggggtgcgcaaagggagactggagaagaaagacgataaaaactgg
gtagagcatttagctgatcattcccagacactaacagactatttaagaatgcagctttcg
ctcgtgccgctgaacaacgagcaaaagcgcatacttgactttttattatataatatggac
gaaaacggatatatgtcgattacggtcgaagaaaccgctggaatgtgcggctgccgggaa
gaaacggctgccgaggttctccagcttattcgggaattggagccagcgggtgtcggagct
gaaaacttacaagattgcttgcttttgcagctcgagcgcatggaaggtgtgccgccgctt
gtccctgtgatcattcaagattatttcattgcgtttgcagagaagaattggcgcctggtg
gccaaaaagctaggtgttgatgtaaaagccatccaggaggcggcggatttcatccagaag
ctcaatccgaagccaggggcccgctttcattacgagcagccgacctatgtccgtccggat
ttgacggtcgtgctgaaaaatgattcgatagaggtgcatttactggaagatgagatgccg
aaaattgtttttcaaaaagactattttgaagaactggcaagccataaggatgagcagttg
aaagaatttatgaaggataaacataaagattatctatggctgctgaaaagtctggagcag
cgtaaacgaaccattcagcgtgtcggcttaaaaattgttgaaaagcaaaaagacttcttt
ttttatggaccgagccgcctgcagccgcttactatgaaggagattgcagatgagcttgaa
attcacgagtccacagtcagccgggccgtgcgcggaaaatacatgcagacaccttatggc
acatatgaattaaagacattctttccggcgggtctgtcaggaggcacggaagagacggct
tctgcggcccaggttaagtcaaagattacggaacttgtcaatggggaaagcaagacaaag
ccgctttccgatcaggaaattagcaatctgttaaaagaagagggatggcaagtatcgaga
agaacagtcgctaagtaccgtgatcagctctttatcccttcttcgtccaaaagaaaacgt
tacgattga
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