Pseudobacillus badius: K7T73_18845
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Entry
K7T73_18845 CDS
T07942
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bbad
Pseudobacillus badius
Pathway
bbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7T73_18845 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbad03021
]
K7T73_18845 (rho)
03019 Messenger RNA biogenesis [BR:
bbad03019
]
K7T73_18845 (rho)
Transcription machinery [BR:
bbad03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K7T73_18845 (rho)
Messenger RNA biogenesis [BR:
bbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K7T73_18845 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UAT30562
LinkDB
All DBs
Position
complement(3639495..3640778)
Genome browser
AA seq
427 aa
AA seq
DB search
MEELTISYLENLKLKELYELARTYKISYYSKLTKKELIFAILKARAEEQGFFFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQIKLETTPRNLSTRIMDLISPVGFGQRGLIVAPPK
AGKTILLKEIANSITANHPEAELIVLLIDERPEEVTDIERSVEAEVISSTFDAVPENHIK
VAELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLIDKEQLDMIWSIRKTMSDSPDLAEKFLRRLRQTKTNEEFVSQLAEEIKSG
GSSKRIL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttaacaatttcttatttagagaatttaaaattaaaggaactttatgagctt
gcgcgcacatacaagatttcctattacagcaaactcacgaaaaaagaattaatctttgca
attttgaaagcgcgcgccgaggaacagggcttcttttttatggaaggcgttcttgaaatt
atccaatctgaaggctttggttttttaagaccgatcaactattcgccaagctctgaagat
atttatatttctgcttcacaaatccgtcggtttgatttaagaaacggtgacaaagtatct
ggtaaagtgcgccctccgaaagaaaatgagcgttactatggcctcctgcacgttgaagcg
gtaaatggagatgatcctgaatctgctaaagagcgtgtccactttccagcattaactcct
ttatatccggatcgccaaattaagcttgaaacgactccaagaaatctgtcaacgcgaatc
atggacttaatttcacctgtcggctttggccagcggggattaattgtggcgccgccaaaa
gcagggaaaaccattttgctgaaagagatcgccaattcgatcaccgctaaccatccagaa
gcagaattgattgttttgcttatcgatgagcgtccagaagaggtaactgacattgaacgg
tctgttgaagcggaagtgatcagctcgacctttgatgccgtgccggaaaatcatattaaa
gtagctgaacttgtgctggagcgggcaatgcgcctcgtcgagcataagcgcgacgtcatt
attttgatggacagcatcacaaggctggctcgggcctataaccttgtcattccgccgagc
ggacgcacgctttccggggggattgatccggccgcattccatcgcccgaaacgctttttc
ggcgcggcgcgcaacatcgaagaaggcggcagcctgacgatcttggcgacggcccttgtt
gataccggctcacggatggacgatgtgatttatgaagaatttaaaggaactggaaacatg
gagcttcatctggatcgttcccttgctgagcgccgcatcttcccggctatcgatattaga
cgctcaggcactcggaaagaagagctgcttatcgacaaagaacagcttgatatgatctgg
tcgatccgcaaaacaatgtctgattcaccggatcttgctgagaagttcttgcgccgtctc
cgccagacaaaaacaaatgaggaatttgtttcccagctggcagaggaaataaaatccggc
ggttcttctaaacgaattttataa
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