Microvenator marinus: FRD01_00880
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Entry
FRD01_00880 CDS
T08125
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbae
Microvenator marinus
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbae03016
]
FRD01_00880 (truB)
Enzymes [BR:
bbae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRD01_00880 (truB)
Transfer RNA biogenesis [BR:
bbae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRD01_00880 (truB)
Prokaryotic type
FRD01_00880 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QED25839
UniProt:
A0A5B8XR48
LinkDB
All DBs
Position
210902..211762
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AA seq
286 aa
AA seq
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MNGLLLINKPEGLTSFDVVRRVKRAASTKKVGHAGTLDPDATGLLVVAVGQGTRLLRYLE
GSTKVYEFDVLFGAQTTTDDHTGEVVATSDVRPTSAAVEQALEKFVGTIVQVPPKYSAVH
VDGQRAYDLARKDVDFELKGREVEISSFEFLGLSGERASFRVHCGSGTYVRSLARDLALE
LGTLGHTARIHRTHVQGYELSEASSLGEIETDAGSCILPMVEILRDFETRQLDDAEVVEI
GHGRSIESNGCRDGERVALVRADGGLMGVGRVEDGRVFPERVVAGT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggcttttactcatcaataaaccagaggggttgacgagcttcgacgtagttcga
cgtgtcaaacgagcagcatctacgaagaaagttgggcacgctggcactttggacccggac
gcaaccgggcttttggtggtcgcggtagggcagggcacacggcttttgagatacttggag
ggttctactaaggtctatgagtttgacgtgttgtttggtgctcagaccaccaccgacgac
catacgggcgaggttgtagcgacgagtgacgtgagacccacgtctgcggcggttgagcaa
gcgctggagaagtttgtggggaccatcgtgcaggttcctccgaagtactcggcagtacat
gtagacgggcagcgtgcttacgatctcgcgaggaaggacgtggactttgagctcaagggg
cgagaagtagagatttcttcgtttgagtttttggggctttctggcgaacgagcgagtttt
cgggtgcattgtggctcaggtacttacgtacgctcgctagcccgagacctcgctcttgag
ctcggaaccttggggcatacggcacgcattcatcgcacccacgtccaaggttacgagttg
tctgaagcctctagtcttggggagattgagacggacgcgggcagctgcatcctgccgatg
gtcgagatcctgagggatttcgagacgaggcaattggacgatgctgaggtggtggagatt
gggcatggtcgaagcattgagtcgaatgggtgtagagatggagagcgggtggccctggtg
cgtgccgacgggggcttgatgggcgtcgggagagtggaagacgggcgggtgtttcctgag
cgggttgttgctggtacgtag
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