Microvenator marinus: FRD01_02315
Help
Entry
FRD01_02315 CDS
T08125
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbae
Microvenator marinus
Pathway
bbae03410
Base excision repair
bbae03430
Mismatch repair
bbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRD01_02315 (recJ)
03430 Mismatch repair
FRD01_02315 (recJ)
03440 Homologous recombination
FRD01_02315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbae03400
]
FRD01_02315 (recJ)
DNA repair and recombination proteins [BR:
bbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FRD01_02315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FRD01_02315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FRD01_02315 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QED26111
UniProt:
A0A5B8XLV3
LinkDB
All DBs
Position
551205..552956
Genome browser
AA seq
583 aa
AA seq
DB search
MASETRHTRDWIVNEPPPEICLALAKDLGISPLTARILVNRGINNATLGDGFLNPTLKSM
HDPFLMKDMRRAVREVLRAIDAGQMITVHGDYDVDGTCSVSVLYGFLKALGARVDYYIPV
RTQDGYGLNIETVRRLHAKGTDLIITVDCGISNADEIRLAKQLGMKTIVVDHHTVPEVLP
PAVAVLNPLRSDCDFPFKGLAAVGVTFNFVVALRSELRKRGIFKIIPEPDLREYLDLVAL
GTVADVVPLVDENRVFVRLGLEVLSSRRRAGVSALMDRAQVEVGPISTRTISFRLAPRIN
AAGRMSDASICVELLTTTSYGRATELAEELEQLNRARQGEEKEILHNALAQAEEQIDLNR
RALVVAGVDWNRGVLGIVASRLMEKYHRPAFLMGIEDGFAKGSARSIDGINIVEALNSVG
DLLATWGGHSAAAGLSLDAVNLEAFRDRIDESIANVFDDGTIPRPRLKIDSEVELHEIDR
QFIVDLNKLAPFGAGNPEPTLLSRRSKALNVRVISNKHLRARFKDESGMIEGFGFAMRDA
IGMLDDTVAIAFVPRLVSNRGESKFEVQLKGVRPSELVFENEP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgagacgagacatactcgggattggatagtcaacgagcccccgcctgagatt
tgtctcgcgctagcgaaagatttagggattagccctctcaccgccagaatccttgtaaac
cggggcataaacaacgcaacgcttggggacggcttcctgaatcccacgttgaagtccatg
cacgatcccttcctgatgaaggatatgaggcgcgccgttcgtgaggttctgcgcgcaata
gatgccggacagatgattacggtccatggggactacgacgtggacggaacctgttccgta
tcggttctctacgggtttttaaaggctcttggtgcacgggtggattattatatcccggtt
cgtactcaggacggttacggactgaatatcgagaccgtgagaagattacatgcgaaaggc
acggaccttatcatcactgtggattgcggaatctccaatgcagacgagattcgactcgcg
aagcaactcggcatgaagaccattgtggtggaccaccatacggtccctgaggttcttcca
cctgctgtggccgtcttaaacccgctgcgttcagattgcgattttccttttaagggactg
gctgccgttggcgtcacattcaattttgtggtcgccttgaggtcggagctgcgaaagcgc
ggtatttttaagatcataccggaacctgacctgcgcgaatatttggacctggttgcactc
ggaactgtggctgacgtggtgcccctcgtggatgagaaccgcgtctttgtgcgacttgga
cttgaggtgctcagctccaggcgtcgcgccggggtctcggcgctgatggaccgcgctcaa
gttgaagtcggtccgatctccacacgaaccattagtttccgcctcgcgccacgcatcaac
gctgcaggacgcatgtcagacgcttcaatttgtgttgagttgctcaccaccactagctac
ggccgtgcaaccgaattggcagaggagctggagcaactgaaccgtgcgcgccagggtgaa
gagaaggagatacttcataatgcgctcgcgcaggccgaggagcaaatcgacttgaatcgg
cgggcactcgtggtggcgggcgtagactggaaccgcggtgtactcggcattgtggcgagc
cgactgatggagaaataccatcggccggcgttcttgatggggattgaagacgggtttgcc
aaaggaagcgcgcgttcgatcgatggaatcaacattgtcgaggccctaaattcggtaggt
gacctcctcgccacgtggggtgggcactcggctgccgctggattgtcattagacgccgtc
aatttggaagcctttcgagaccgaatcgacgagagcattgcaaatgtcttcgatgacgga
accattccaaggcccaggctcaagatcgactctgaagtggaacttcatgagatcgatcgc
cagttcattgtggacctcaataaactggctccgtttggtgcgggcaaccctgaacccaca
ctgctctcccggcggtcaaaagcgctcaacgtgagggtgatctcaaacaaacacttgagg
gcacgctttaaagacgagtcggggatgatcgaggggtttggtttcgcgatgcgcgacgcc
attggcatgcttgatgacactgtggctatcgctttcgtgccgagactagtctccaaccga
ggcgaatctaaattcgaagttcagctcaagggcgttcgtccgtccgagctcgtgtttgag
aatgaaccgtga
DBGET
integrated database retrieval system
