Allomicrovenator marinus: FRD01_03860
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Entry
FRD01_03860 CDS
T08125
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bbae
Allomicrovenator marinus
Pathway
bbae03030
DNA replication
bbae03430
Mismatch repair
bbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRD01_03860 (holA)
03430 Mismatch repair
FRD01_03860 (holA)
03440 Homologous recombination
FRD01_03860 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbae03032
]
FRD01_03860 (holA)
03400 DNA repair and recombination proteins [BR:
bbae03400
]
FRD01_03860 (holA)
Enzymes [BR:
bbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRD01_03860 (holA)
DNA replication proteins [BR:
bbae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRD01_03860 (holA)
DNA repair and recombination proteins [BR:
bbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRD01_03860 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
QED26398
UniProt:
A0A5B8XN13
LinkDB
All DBs
Position
899725..900768
Genome browser
AA seq
347 aa
AA seq
DB search
MSRNKRADERRELFKSLKAGKLAPVYYVHGPDAFMLESAIDAIVAAAAPEGLNEFNHDKF
RGRDAQGANVRAAAEQLPFMVPRRIVILRNVEEMPNAELEAFSEYFQDPSPTTVLIIHAL
TANSSLDARLSAVKKLRKAAEEYEFQAFYEDELGEFIARHANDRNLKLTSDANAYLVESI
GTELFLVVDALERVDLYLGDSETRREVDLECVRHVVAHTRVHSVFALTEAIGARNTERAF
QIFNTMAQTESPIKLAALIARHFRILLKLKDTALRSADRNTLARAVGVAPFFLKDYQRDA
ERFSRSALVQIHTWLLETDYALKSSKVADRILMEALLFKICSKDALV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagccggaacaagcgcgcagatgagagacgagagctcttcaagtccctaaaagcagga
aagctcgcccctgtgtactatgtgcacggtccagacgccttcatgctcgagtcagccatc
gacgccatcgttgcggcggcggcgccagagggtttgaacgagttcaaccacgacaaattt
cgtggccgagacgcccaaggcgctaatgtgcgcgcggctgctgagcaattgcccttcatg
gttcctcgccgaatcgtgattttgagaaatgtggaagagatgcccaacgccgagttggaa
gcgttttccgaatatttccaggatccttcgccaacaacggtgctgatcatccacgcgctg
acggcgaactcaagcctcgacgcgaggctctcggcggtcaagaagctgcgcaaggctgca
gaagagtatgagtttcaggcgttctacgaggatgaactcggtgagttcatcgcaagacat
gcaaacgatagaaacctgaagctgacttcggacgctaacgcctatttggtggagtccatt
ggaaccgagctctttctggtagtggacgcccttgaacgcgtggatctttaccttggagac
tccgagacgcggcgagaagtggacctcgaatgcgtacgacatgtggtggcccatacccgc
gtccactcggtcttcgcgctcaccgaggcaattggcgcacgcaacaccgaacgtgcgttc
cagatcttcaacacgatggcgcagaccgaatcgccgatcaaattggcggcacttatcgca
cggcatttccgaatcttactgaagctcaaagacacggctttgaggagcgccgatcgcaac
acgctcgcacgggctgtgggtgtggccccattcttcctgaaagactatcaacgcgacgcg
gagcgtttctcacgctcagcattggtacaaatccacacgtggttgctcgagaccgactac
gcgctcaagtcgagcaaggtcgcggaccgaattttaatggaagcacttctgttcaagatt
tgttcaaaagacgccttagtctga
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