Microvenator marinus: FRD01_14035
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Entry
FRD01_14035 CDS
T08125
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bbae
Microvenator marinus
Pathway
bbae00521
Streptomycin biosynthesis
bbae00523
Polyketide sugar unit biosynthesis
bbae00525
Acarbose and validamycin biosynthesis
bbae00541
Biosynthesis of various nucleotide sugars
bbae01100
Metabolic pathways
bbae01110
Biosynthesis of secondary metabolites
bbae01250
Biosynthesis of nucleotide sugars
Module
bbae_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FRD01_14035 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FRD01_14035 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FRD01_14035 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FRD01_14035 (rfbB)
00525 Acarbose and validamycin biosynthesis
FRD01_14035 (rfbB)
Enzymes [BR:
bbae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FRD01_14035 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
KR
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QED28330
UniProt:
A0A5B8XRQ0
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Position
complement(3417065..3418129)
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AA seq
354 aa
AA seq
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MKTVLVTGGAGFIGSALIRYLFQHTDWNIVNVDKLTYAGHLESLEGVSEGARYRFVQADI
CDAQAMGELIRTTQPDTIMHLAAESHVDRSIDGPGEFIQTNIVGTAVLLQVARDYYETLD
GTKRAGFRFHHISTDEVFGELGAEGFFTEDTPYSPRSPYSASKASSDHLVRAWYHTFGLP
VLITNCSNNYGPYQFPEKLIPVVILKARNHDAIPVYGKGDNIRDWLYVDDHVRALVRVVE
HGKVGETYNIGGHNEKTNLEVVHTICGLLDEFLPGTKHADFITFVKDRPGHDLRYAIDAS
KIESELGWTPEETFDSGIRRTVQWYLERLDWCRAVLGDETKISRLGLSSGTQAG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttgaagactgtattagtgactggtggtgctggatttattggttcggcgctgattcgatac
ctctttcagcatacggactggaatatcgtcaatgtggacaagttgacgtacgccggccac
cttgagtcgctcgaaggcgtgagtgaaggtgcacgatatcggtttgttcaggccgatata
tgtgacgcgcaggctatgggagagttgattcgaacgactcagcccgacaccatcatgcac
ctcgccgctgagtcgcacgtagaccgttctatcgatggtcccggcgagttcattcaaacg
aatattgtgggcactgcggtactgcttcaggtggcgcgggattattatgaaacgcttgac
ggcacgaaacgtgccgggttcagattccaccacatctcaacggatgaggtcttcggagag
cttggagccgaagggttctttaccgaggatacgccttattctccgcggtctccgtacagt
gcgtccaaggcgtcatccgaccacctcgtgcgtgcgtggtaccatacgttcgggctccct
gttctgatcacgaactgctcgaataattacggcccgtatcagttcccggagaagttgatt
cctgtggtgattctcaaggctcgaaatcacgacgcgattccggtgtatggaaagggcgat
aatatccgtgattggctctatgtagacgaccatgtgcgggcgctggtgcgcgtggtggag
catggcaaagtgggtgagacctacaatattggtggtcacaacgagaagacaaatctcgag
gttgtacatacgatttgtggacttttggatgagttcctccccggcacgaaacatgccgac
ttcattacctttgtgaaggaccgcccgggccacgatcttcgttatgccatcgacgcctcg
aagattgagagtgagctcggttggacgcccgaagaaacgttcgattcgggaattcgtcgc
acggttcagtggtaccttgagaggttggattggtgccgagcggttttgggtgatgagact
aagatttcgagattgggtctctcgtctggaactcaggcgggttag
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