Microvenator marinus: FRD01_15415
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Entry
FRD01_15415 CDS
T08125
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbae
Microvenator marinus
Pathway
bbae03030
DNA replication
bbae03430
Mismatch repair
bbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRD01_15415 (dnaE)
03430 Mismatch repair
FRD01_15415 (dnaE)
03440 Homologous recombination
FRD01_15415 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbae03032
]
FRD01_15415 (dnaE)
03400 DNA repair and recombination proteins [BR:
bbae03400
]
FRD01_15415 (dnaE)
Enzymes [BR:
bbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRD01_15415 (dnaE)
DNA replication proteins [BR:
bbae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRD01_15415 (dnaE)
DNA repair and recombination proteins [BR:
bbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRD01_15415 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
QED28597
UniProt:
A0A5B8XTY8
LinkDB
All DBs
Position
3767229..3770789
Genome browser
AA seq
1186 aa
AA seq
DB search
MSQFVHLHVHTQYSLLDGALRIPDLMSKVKEMGMGAVAMTDHGNLYGAVDFQKAAKKKGL
KSIIGCEMYVTLQPYTESTDPKSYHLTVLAQNLKGYKNLMLLNSYGWLYGLHERTNTPRI
DFELLSQHHEGLIVLSGDLGGEVNQQILRGELAQARETATKYRDLLGPDHYYLELMDNAL
DEQRKCNEELIQIGEELGIPLVATSDCHYLNREDARAHAVLMCIQLGKSVDLERVLEHGV
DQLYVRSPDEMIQAFSHVPEAISNTVKIAEMCDLEIPLGQVFLPQYDVPEEFLKSGEITD
IKVGIREYFKFISREGLQARFDEFSSIGKAVDEDEYRERLEVELDVICNMDFPGYFLIVW
DFINWAKENGIPVGPGRGSGAGSLVAYAMSITDIDPIPYELLFERFLNPERVSMPDFDID
FCMNRRLEVIQYVTEKYGQHNVGQIITYGQLKARACIRDVGRALNFSFGETDRIAKLVPE
ELGISLEDALKKEPRLQEMCDAEPAVKDLFDIALSLENLNRQAGIHAAGVVISEGVLWDY
VPICRGANGEIVTQFAKNEVEEAGLVKFDFLGLKTLTVVDDAVRLINHQRGIRGEEPFDI
RTIPLDDPSVYKLISAGNTTGVFQLESSGFQELLIKLKPDCFEDIVAAVALYRPGPLGSG
MVDDFVDRKHGRKRVEYPHPWLEETLKPTYGVMVYQEQVMRTAQVMAGYTLGGADILRRA
MGKKKPEEMAKQKAIFIEGAEKLEVETRKAEEIFELMEFFAGYGFNKSHSAAYALITYQT
AYLKCHYEVEFMAALMTNDRDNTDKIVRFINEAKGMGIDVLPPDVNESGLDFGVVEGKIR
FGLGAIKGVGAAVIETIVETRNEGGRFKNIFDFCARVDSKKLNKRTLETLVRCGAFDSVG
PHDGSLYIGDIALARAQMVAVIDQAVDQGSKAQHDKAVGQSSLFGMMAPAAQETFLEVSF
PDVPALSDTEILDSEKTLLGFYVTGHPLDRFDREVGLYGVTAAAQIVQYGNNRDTVAVAG
VITEYRERPLKSGNGRMAFLQFEDKSGAVEVLVFASVFAEYEETIKSGQPLLVKGSVFED
GDGDAKQRKVRAESFVQMAEARRERVTKVKLEINVSEVKNGELEKVQQLLRDHAGTCQTS
LAMCLDREHGQGRVELSLSEQFWVDPTDEFLMNVERVFRRSIVTMA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtttgttcatctccacgtccatactcagtattcgcttctcgacggtgcgctt
cgcattccggacttgatgtccaaagtcaaagagatggggatgggagccgtggcgatgaca
gaccacggcaatttgtacggtgctgtggacttccaaaaggcggcgaaaaagaaggggctc
aagtcgattatcggctgtgagatgtacgtcaccctgcagccttacaccgagagcacagac
cctaagagctatcacctcaccgtgctcgcccagaacctcaaaggctataagaatctgatg
ctcctgaattcgtacgggtggctctatggccttcatgagcgcacgaacacgccgcggata
gattttgagctcttaagtcagcatcatgagggcttgatcgttctcagcggggacctcggc
ggtgaggtcaaccagcagattctgcgcggggagctcgcacaggcgcgtgaaacggcgacc
aagtatcgcgacctgcttgggccggaccactattacctcgagctcatggacaacgcgctc
gatgagcaacgcaagtgcaatgaggagctcattcaaatcggcgaggagcttggaattcca
ttggttgcgacgagcgattgtcattacctcaatcgtgaggacgcaagggcccatgcggtt
ctaatgtgtattcagcttgggaaatcggtggatttggagcgggtgctcgaacacggtgta
gaccagctctatgtgagaagtcccgacgagatgattcaggcgtttagccacgtgcctgag
gccatttcaaatacggtcaagatcgccgagatgtgcgacctcgaaatcccgcttgggcaa
gtctttttaccgcaatacgacgtgccagaggagttcttgaagtccggtgagataaccgac
atcaaggtcggtatccgggagtacttcaagttcatttcgcgtgagggtttgcaggcgcgt
ttcgatgagtttagttccataggcaaggcggttgatgaggacgagtatcgcgaacgcctc
gaggttgagctcgacgtgatttgcaatatggacttcccaggatacttcctcatcgtttgg
gacttcatcaactgggccaaagaaaacggaattccggttgggccaggtcgcggttcgggt
gccggctcactggttgcgtacgcgatgtcgattacagatatcgacccaattccttacgaa
cttctcttcgagcgcttcttgaatcctgagcgcgtctcgatgccggacttcgatatcgac
ttctgcatgaacaggcgcctcgaggtcattcagtacgtcaccgagaagtacgggcagcat
aacgtgggccagattatcacctacgggcagctcaaggcgcgtgcctgtatccgcgacgtt
gggcgtgcgctgaactttagttttggagagacggaccgtatcgcaaagctcgtccctgaa
gagctcggaatctcgcttgaggacgcactcaaaaaggagcctcgtctccaggagatgtgc
gacgccgagcccgccgtcaaagacctctttgatatcgcgctctcgctcgaaaacctcaac
cgtcaggcgggcatccacgcggcgggtgtggtgatttccgagggcgtactctgggattac
gtcccgatttgtcgtggcgcaaacggcgagattgtcacgcagtttgcgaagaacgaggtt
gaggaagcgggccttgtgaagttcgacttcttgggactcaagacgctcacggtggtggac
gacgcggtgcggcttatcaatcaccagcgcggcatccgtggtgaagagccctttgatatt
cggactattccgctcgacgatccgtcggtctacaagttgatttctgccggaaataccacg
ggtgtcttccagctagagtcctcgggtttccaagaactccttatcaagctcaagcccgac
tgctttgaggatatcgtggctgcggtggcgctctaccgtccgggaccgctcggctcgggc
atggtggacgatttcgtggaccgcaaacacgggcgaaagcgcgtggagtacccgcaccca
tggctcgaggaaacgctcaaacctacgtatggtgtgatggtctatcaggaacaggtgatg
cgtacggcgcaggtgatggcgggctatacgctcggtggcgccgatattttgcggcgcgcg
atgggcaagaagaagcctgaggaaatggccaaacaaaaggctattttcattgaaggcgcc
gagaaactcgaggttgaaacacgcaaagcggaagagatcttcgaactgatggagttcttc
gcgggctacggcttcaacaagtcgcactcggccgcatacgcgctcatcacctatcaaacc
gcgtatttgaaatgccattacgaagtggaattcatggcggctctgatgacgaacgaccgt
gataacacggataaaatcgttcgattcatcaacgaagctaaaggcatggggatcgatgtt
ttgcctcccgacgtcaacgaatccgggctcgatttcggtgtggtcgagggcaagattcgc
ttcggactcggtgctatcaagggtgttggagcagcggtgatcgagacgatcgtcgagacg
cggaacgagggtggtaggtttaagaatatctttgatttctgtgctcgtgtggactcgaag
aagctcaataaacgcacgcttgagacgctggtgcgttgtggggcgtttgactcggttggg
ccgcacgacggctcgctctatatcggtgatattgccctcgcccgcgcgcagatggtggcc
gtgattgaccaggccgttgaccagggctctaaggcacaacacgacaaggctgtagggcag
tcgagcctctttggaatgatggcgcccgcggcgcaggagacgttcttagaagtctcgttc
ccggacgttccggcgctttcggacacggagattctggactctgagaagacgctccttggg
ttctacgtgaccgggcatcccctagatcggtttgaccgagaagtcggcctctacggggtc
acagcagcggctcagatcgttcagtacgggaacaaccgcgatacggtggcagtggctggc
gtgattacggaatatcgcgagcgaccgctcaagagcggcaacggtcgtatggcattcctt
cagtttgaggataagtcgggtgcggttgaggtccttgtgttcgcctcggtttttgcggag
tacgaggagaccatcaagtccgggcagccgcttctggtcaaaggatccgtgtttgaagac
ggggatggtgacgccaaacaacgcaaggttcgtgctgagagttttgtgcagatggccgaa
gcccggcgcgagcgggtgaccaaggtgaagcttgagatcaacgtttctgaggtcaagaac
ggggagctcgagaaagtgcagcaacttcttcgagaccacgctggcacatgtcagacaagc
ctcgccatgtgccttgaccgcgaacacgggcaaggccgtgtggaactcagcctctctgaa
caattctgggtggaccccacagacgaattcttgatgaacgttgagagggtctttcggcgt
tcgattgtgacgatggcgtag
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