Allomicrovenator marinus: FRD01_15440
Help
Entry
FRD01_15440 CDS
T08125
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbae
Allomicrovenator marinus
Pathway
bbae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRD01_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbae03400
]
FRD01_15440
Enzymes [BR:
bbae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FRD01_15440
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FRD01_15440
DNA repair and recombination proteins [BR:
bbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRD01_15440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
DUF7826
Motif
Other DBs
NCBI-ProteinID:
QED28601
UniProt:
A0A5B8XTJ2
LinkDB
All DBs
Position
3775757..3776548
Genome browser
AA seq
263 aa
AA seq
DB search
MPELGEVEIARKHLQSWWTDAASTFHLIDAKVLKSGEPADLERQISQTPRAFKRRGKQLW
VEFADGPHLAFHFRMTGQIVRTTSPEERFSRIAWQVGDSWLHFVDPRRFGYVEVWTDSER
DAALAKLGPDPHAADPKLMREKAGARQLKAALLDQSVIAGVGNIAFIEVMWRLGLHPEIK
GSQLSKAEWSRLIQAFVDFFDEVVERDFSPEQGRIDYVNTGGTNPFEIYQQDQCPKCSGG
IERLVQGGRSTYFCPRCQRSGRR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactcggtgaagtcgaaatcgcacgcaagcatttgcagtcatggtggacggat
gccgcgagcacgttccatctgattgatgccaaggttctgaaatccggcgagccggccgat
ttagaacgccagatatcccaaactcctagggcttttaagaggcgcggaaagcagctctgg
gtcgagttcgcagatggcccgcatcttgcgtttcacttccgtatgacgggccagatcgtg
cgcacaacaagccccgaagagcgattctccagaatcgcctggcaggtaggcgatagctgg
cttcattttgtggacccgaggcgttttggatacgttgaggtctggacggattccgagcgc
gacgcagcgctagccaaacttgggccagacccgcacgccgccgacccgaaactgatgcga
gagaaggctggcgcgcgccaactcaaggccgcgctcctagaccaaagtgtgatcgctggt
gttggaaatatcgcgttcatcgaggtgatgtggcgccttggccttcatcctgaaatcaag
ggtagccagcttagcaaggccgagtggagtcggctgattcaggcctttgtagacttcttc
gatgaagtcgtagagcgggacttcagccccgagcaggggcgtatcgactacgtgaatacg
ggcggcaccaatccctttgagatttatcagcaagaccaatgtcctaagtgctcgggcggc
atcgaacgtcttgtacagggtgggcgttccacgtacttttgtccgcgatgccagcgttcg
ggcaggcgttag
DBGET
integrated database retrieval system
