Microvenator marinus: FRD01_17955
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Entry
FRD01_17955 CDS
T08125
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbae
Microvenator marinus
Pathway
bbae02020
Two-component system
bbae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRD01_17955 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FRD01_17955 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbae03021
]
FRD01_17955 (rpoN)
Transcription machinery [BR:
bbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRD01_17955 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
YutD-like
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
QED29089
UniProt:
A0A5B8Y0A7
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All DBs
Position
4358955..4360412
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AA seq
485 aa
AA seq
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MAMELRQQVKMSQQLRMTPQLQQAIKLLQLSRMELINAVRQEMVENPVLEEIQDAQDSRD
DRTEFDRRAEEFESPAKNEERAEERDVKEKIDWESYLENYSAPTPGNSYLGMNEERSLEQ
TLSTSESLVDHLMEQVRLSGMNEDEEYIATLIIGNLDEAGYLRNSTVEEIAEDAEVSVED
VEFVLGIIQHEFDPLGVAARDLRECLLIQAAVLYPRDTLIEEMIRDHIPNLERKSFAKIA
KAVDADEDEVIDAARAISMLEPKPGRAFMDSSADYITPDIYIRKVGDDYVPILNDDGMPK
LKISGYYKRELAKKKASGGQDEVKDYIQDKLRGAMWLIRSIHQRQNTIMKVTESIIKFQK
DFFDKGVEHLKPLVLRDVADDIEMHESTVSRVTTNKYVHTPRGTFELKYFFNSSITNLDG
EDLASQAVKAKIKDIISNEDGRKPLSDAKIVEILGKEGIDIARRTVAKYRESLGILSSAK
RKQVY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaattaagacaacaggtcaagatgagccagcagttgcggatgactccgcaa
cttcagcaagcgatcaagctcttacagctttcgcgtatggagctcatcaacgccgttcgc
caggagatggttgaaaacccggttcttgaggagattcaggacgcacaagactcgagggac
gatcgaaccgagtttgatcggcgtgccgaggagttcgagtcacctgcaaagaacgaggaa
cgtgccgaagaaagagacgtcaaagaaaagatcgattgggagagttatttagagaactat
tcggcgccaaccccggggaactcctacctcggtatgaacgaggagcgtagccttgagcag
accctctcgacgagcgagtcccttgtggaccacttgatggagcaggttcgactctctggt
atgaacgaggacgaggaatacatcgcgaccttgatcatcggaaatctggacgaagctgga
tacctgcggaattcaacggttgaggagatcgctgaggacgcggaagtctcggttgaagac
gtggagtttgtgctgggcattattcaacatgagtttgatcctttgggcgttgccgctcgg
gatctgcgcgagtgtcttttgatacaggccgccgtcctctacccaagggatacacttatc
gaagagatgatcagggatcatattcctaacctcgagcgcaagagttttgcgaagatcgca
aaggctgtagacgccgatgaagacgaggtcatcgacgccgcccgcgccatctcaatgctt
gagcccaagccagggcgcgcctttatggattcgagcgcagattatatcacccccgatatc
tacattcgtaaagtgggtgacgactacgtgccgatcctcaatgatgacggaatgccgaaa
ctaaagatttcaggctattacaagcgtgagttggcgaaaaagaaggcatcaggtggacaa
gatgaagtcaaggattacattcaagacaagctccgaggagcgatgtggttgatccgcagt
attcatcagcgtcagaacaccatcatgaaagtcaccgagagcatcatcaagtttcagaag
gacttcttcgacaaaggggttgaacacctgaagcctttggtcttgcgcgacgtggcggac
gatatcgagatgcacgaatcgaccgtgagccgtgtcaccacgaataagtacgtacacaca
cctcggggcacgtttgagctcaaatacttcttcaactcgtcgattacgaacctcgacgga
gaagaccttgcgagtcaggcggttaaggcaaaaatcaaagatatcatttcgaatgaagac
gggcgcaaacccttgagtgacgcaaaaattgtggaaattttggggaaagagggaattgac
atcgcccgtcgaacggttgccaaatacagggagagtcttggcatactctcgagcgcgaag
cgcaaacaggtctattga
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