Microvenator marinus: FRD01_17995
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Entry
FRD01_17995 CDS
T08125
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bbae
Microvenator marinus
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbae03016
]
FRD01_17995
Enzymes [BR:
bbae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FRD01_17995
Transfer RNA biogenesis [BR:
bbae03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FRD01_17995
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
CSD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QED29097
UniProt:
A0A5B8XV99
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Position
4366561..4368525
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AA seq
654 aa
AA seq
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MIVEGSIVEFTHHGESRLGVVKRLLGKKALVMGLDSTQFRPKLKDIQEILGNAGEADVDQ
VLGGLEAEAQVLVEDIDVEALWGLVEAGETYATTELADFAGGASPSQVLALRRALEADSL
YFRAVDKGWQARDARLLASLSEQARERDAKAKERDQEKRWLSSALKGSAGCQDAPRGLIS
RLQDVVLHPNSEDADLFLEFLRQTEDEVGEYLPGVGVLKVFELLVRLGVYSKHENLERRK
WKIRDHELRIQDLAAALKASEASRLDLEQEWTFTVDDAQTRDMDDGLSLRSKKDGSWLVG
VHIADVSAWVPKGHELDLDAIRRGTSVYLVEDEIPMFPRVLSHGNLSLVKGERRAALSLL
MTFDRGLELKAWEFKETWVRVAERLTYDEVDKILSEESTEEHTDRIHTMFKIAEQLRSER
ESRGARSLELPTSHVELRGEEPVIWSVSDTASRRLVQEFMVAYNAKVAEVFDKANIPAVF
RGQEPAEQELEPLEGVAGEFAVLKTMRKSSMGLSPMPHASLGLAAYVQATSPIRRYLDLV
HQRQLKSWLHHQALPYEDQELYGVLAEVSEAAMHAQEVERASRRYWLLVALGARTNEEFD
AIVLDENRQVLLTEFGVIETVSTAERMPLGAKIRVRVDHADARRGELVLTFVHS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgatagtcgaaggtagcatcgtcgaatttactcaccacggggaatccagacttggagtc
gtcaagagacttctcggcaagaaggctctggtcatgggtctggactccacgcagtttcgt
ccaaagctcaaggacattcaggagattctggggaacgcaggtgaggccgatgtggaccag
gttcttggaggtctggaggccgaagctcaggttctggtcgaggatattgatgtagaggcg
ctctggggattggtagaggctggcgagacctacgccactacagaacttgcagactttgcg
gggggcgcgagcccgagccaggtcttggcccttcggcgcgcacttgaggcggatagcctc
tacttccgggcggtagacaagggttggcaagccagggacgcgagactcctggcgtctttg
agcgaacaagcccgtgaacgcgatgcaaaggcgaaggagcgcgaccaggagaagcgttgg
ctgtcttcggccttgaagggctcggctgggtgtcaagatgctcctcgtggactgatatct
cggcttcaagacgtggtactgcacccgaactctgaggacgctgatttgtttcttgagttc
ctacggcagaccgaggacgaggtaggggagtatctgccaggtgtaggcgtgctcaaggtt
tttgagcttttggtgcgtcttggtgtctattcaaagcacgaaaacctggagcgtcgcaaa
tggaagatacgagaccatgagctgaggattcaggacctagcggctgccctaaaagcatct
gaggcgtctcggctagaccttgagcaggagtggacctttactgtggacgatgcccagact
cgcgacatggacgatgggttgagtctgaggtcaaagaaggacggctcgtggttggtcggg
gtacatatcgcggatgtctccgcgtgggtgcccaagggacacgagctcgacttggatgcg
attcggcgtggaacttcggtctatctggtagaagatgaaattccgatgtttcccagagtt
ttgagtcacgggaatctgagtttggtcaaaggcgagcgccgtgcggccctgagcctcttg
atgacttttgatcgtgggctggagctcaaggcatgggagttcaaggagacctgggtgcgt
gttgccgagcggttgacctacgatgaggtcgacaagattttgagtgaggagtcgactgag
gaacataccgatcgaatccacacgatgttcaagattgccgaacagctcaggtctgagcgg
gagtcaaggggagcgcgaagccttgagcttccaacttcgcacgtcgagcttcgtggcgag
gaacctgtgatttggtcggtgtctgatacggcttctcgacgattggttcaggagttcatg
gtcgcctacaacgccaaggttgccgaagtgtttgataaggcgaatattcctgccgtcttt
agaggtcaggagccggcggaacaggagctcgagccgttggaaggcgttgccggcgagttt
gctgtgctgaagactatgcgtaagtcgagcatgggtctaagcccaatgccacacgcgagc
ctgggtcttgcggcctatgttcaggcgacgagcccgatccgacgctacctcgaccttgtg
catcaaaggcagctcaagtcatggctccatcatcaagcccttccctacgaggaccaagag
ctctacggcgtgctcgccgaggtctctgaagcggcgatgcacgcacaagaggttgagcgt
gcgtctcgccgttattggctattggtggcgctgggtgcccggacgaacgaggagtttgac
gccatcgtactagacgaaaaccgtcaggtcttgctcacagaatttggtgtgatcgagacg
gtttctacggcggaacgcatgccactaggggccaagattcgtgtgcgcgtggaccacgca
gatgcgcgccgtggcgaattggtgctaacttttgtacattcctga
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