Microvenator marinus: FRD01_19370
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Entry
FRD01_19370 CDS
T08125
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bbae
Microvenator marinus
Pathway
bbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRD01_19370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbae03400
]
FRD01_19370
Enzymes [BR:
bbae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FRD01_19370
DNA repair and recombination proteins [BR:
bbae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FRD01_19370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
QED29354
UniProt:
A0A5B8XVB8
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All DBs
Position
4716243..4719617
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AA seq
1124 aa
AA seq
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MFKLYAWPDAEVLVRELAYEIDASRVDVFEDVHVLTPNQTLGGFLELGLARHSRSQIAAN
VTFSRLESYLTKLLEKADERLRVLNSDMLQSLVLSVLNDQDFLESPEARDPRMYVEPAEL
DGLDIARETRAFQLSSKVAGLFTDYAWSRPELLEAWSEGRLLYDDETERWQRAIWRRIFD
HEQAIEAHSKRYVFLFNGLALLSDDALRKVLPKRLYFFGFPHLSASYHAFLERLKRLSDV
HYFCLLPDPESGSDDKALHYWGPKVAVTMSALHKLADTMAPFEGSPPIESDSLSALQALI
RGEEFYASSLAPEGVILAKTTGIKREVEVVANAIWTRLSKDQSLFLSDFAVVIAGQKSAE
YLAQIETVFRSFHDLRFSVAGRRTHEQSRIFGAIQALFELPLGEFSRSQVLGCLLHPNIQ
IQCPDANAEAWLTWCEKTGIFHGHSHEAHAGTYIQKDIYNWDQGLRRLALGSFLRATTDE
LFEADRGDYLPEEVDQSGIGAASAFNLFARSLINDALWLSEKKLSLKQWSQLLLEFVEIY
VGADRADMDTYQSERGELTLVGMVLARLGEQDVNESKIGYRSATLMALAALERVQTRAGR
LALDAVCVAEPSTIQGISFQHIFVLGLGEGEFPSSFLPEPLDLREREPKPHDVTPNLRDR
LAFLHLILAARKSLTLSWVSKDATTGDELEPASVVSELEHIMRTNRFDVVVEDHPLRRFN
VECGYFSGNKSLGQNHHPEAYREAVLARLHADLHAHFVSKAQVMPPVWQLTRALGDGEIN
TLFWLNRKIGLHTSRAQIAHEEPRRKVKRVRVSLSRIKAFLLSPLQGIAKHHLGFIDDDD
PVLQDRESFGNAVWGYTVLMRDFFIQEMVAGRVGQGGVAQRFAQVKDFKAEVLGELPTGV
FRDMDLPRIQSVLEGWESGVGPMQPPVIYSINEEVSDGQTRIEFPPIPLQKDLEIEIFGV
LPPLDGARFLQFATASSSKIKYAMDAYVAHVVLSAMPEFCGTHRTAFVQLAEKNQTYQFT
PLSSSEAMEILLNILRDLVEPEEGYMMPLEVVEKWADQKRNPKPFSKLLEDDKNDIYSRN
TYTYGPIKDYRPYGPPSDLHGRAQRYFAALNHLNEALSRRQGDQ
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattatatgcgtggcctgatgcggaggttctcgttcgcgagttggcctatgag
attgacgcatcgcgagtagacgtctttgaagacgttcatgtcctgactccaaatcaaacc
ctcggtgggttcctggagttggggctcgcacgccattcgcgctcccagattgcggccaat
gttacgttttcacggctcgaatcctatttgaccaaacttttggagaaagccgacgaacgc
ctgagagtcttgaactcagatatgctccagagtttggtgctctcggtgctcaatgaccag
gactttttggagagtccggaggctcgagaccctcgcatgtacgttgagcctgcggagctt
gatggcctagacatcgcgcgagagacgcgagcgttccaactctcttccaaggtcgccggg
ctcttcaccgactacgcgtggtctcgcccggagttattagaggcctggtccgaggggcga
ttgctctacgacgatgaaaccgagaggtggcagcgcgccatctggcgtcggattttcgac
catgagcaggcgatcgaggcccactcaaagcgatacgtctttctcttcaatggcctcgct
ttgctctccgatgatgcccttaggaaggtgcttccaaagaggctctatttctttgggttt
ccgcacctgagcgcctcgtatcacgcgttcttagagcgtttgaaacggctatctgatgtc
cactacttctgtcttttgcctgaccccgaatcaggctcggacgacaaggcactccactac
tggggcccgaaggtcgctgtgaccatgagtgctcttcataaactcgcggataccatggct
ccgtttgaagggtctccgccgattgaatcggatagtttgagtgccctgcaggcgttgatc
cgtggagaggagttctacgcgtcgagcctcgcgcctgaaggtgtgatattggccaagact
accgggattaagcgtgaagtcgaggtggttgcgaacgcgatttggacacgcttgagcaag
gaccaaagtctctttctctcagactttgcagtggtgatcgcgggtcaaaaaagtgccgag
tacctggctcagattgagaccgttttccgctcctttcacgaccttagattcagcgtcgcc
gggcgccgaacccacgaacaaagccggattttcggcgccattcaagcactctttgagctc
ccgctcggggagttttcacgctcgcaggttcttgggtgtttgttgcacccaaacatccag
attcagtgcccggatgctaatgccgaagcatggctgacctggtgcgagaagacggggata
ttccacggtcattcacatgaggcgcacgctgggacctatattcagaaggatatctacaac
tgggaccaggggctgaggcgccttgcgctcggaagcttcttgcgcgcgaccactgatgaa
ctcttcgaggccgatcgcggcgactatttgcccgaagaagtggaccagtctggaatcggt
gcagcatctgcgtttaatctctttgcgcgctcactcattaacgacgcgctttggctcagc
gagaagaaactctcgcttaagcagtggagccaacttctgctggagtttgtagagatttac
gtcggcgcggaccgtgccgatatggacacctaccagtccgagcgcggcgagctcacgctt
gtgggtatggtgctcgcgaggctcggtgaacaagacgtcaatgagtccaagattggctat
cgtagcgctacgttgatggcgctggcagccctggagcgcgtacaaactcgcgcaggaaga
ctcgcgctcgatgccgtgtgcgtcgcggagccatccaccattcaagggatcagcttccag
catatcttcgtgctggggctcggcgagggagagtttccttcctcgtttttgccggagccg
ctcgaccttcgcgagcgtgaaccgaagcctcatgacgtgactccgaatctgagagacagg
ctcgcatttctgcacctgatactagccgcgcgaaagtccttgaccctctcctgggtttcc
aaggacgccacaaccggtgatgagctcgagcccgcgtcagtggtctctgaactcgagcat
atcatgcgcaccaatcgttttgatgtggtggtcgaggaccatccgctgcgcagatttaac
gtggaatgcggctatttttccggcaacaaaagtttgggtcagaaccatcatccagaggcc
tatcgtgaggccgtgctcgcgaggctccacgccgatttgcacgcgcattttgtgtcgaag
gcgcaagtgatgccgcccgtgtggcagctcacgcgagccctcggtgacggagaaatcaac
acgctcttctggttgaatcgtaagatcggtctgcacacctcacgcgcccagattgcgcac
gaggagccacgtcgaaaggtcaaacgtgtccgcgtgtcactctcgcgaattaaggcgttt
ttgctctcaccgctgcaaggaattgccaagcaccatctaggctttatcgacgacgatgac
ccggtgctccaggatcgtgagtcctttggtaatgccgtttggggatataccgttttgatg
cgtgatttctttatccaagagatggtggcgggccgagtagggcagggtggggtggctcag
cgttttgctcaagtcaaggacttcaaggcagaggttttgggcgagcttcctactggggta
tttcgagacatggacctgccgagaattcagagtgtgctcgagggctgggagtctggagtt
gggccaatgcagccaccggtaatctacagcatcaacgaggaggtttctgacggacagacg
cggattgagttcccgcctattccactgcaaaaagatctggaaattgagatttttggagtg
cttccgcctttggatggcgcccgattcttgcagtttgcgaccgcctcaagttctaagatc
aagtacgcgatggacgcctatgtggcccatgtagttctctctgcgatgccggagttttgc
ggtacacaccgtaccgcattcgtgcagctcgcggagaaaaaccaaacctatcagtttacg
ccgctaagcagttccgaggcgatggagatactcctgaacatccttcgcgaccttgtcgag
ccggaagaaggctacatgatgccgcttgaggtcgttgaaaaatgggccgatcaaaagcga
aatccaaagccgttttctaagctcttggaagacgataagaacgacatctactcgcgcaac
acttacacttacggccccatcaaggactaccgtccctacggtccgccttcggatttacac
ggccgagcgcagcgctattttgctgccctgaatcatctgaatgaggctttatcgagaagg
cagggtgaccaatga
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