KEGG   Microvenator marinus: FRD01_20605
Entry
FRD01_20605       CDS       T08125                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bbae  Microvenator marinus
Pathway
bbae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FRD01_20605 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbae03019]
    FRD01_20605 (rny)
Messenger RNA biogenesis [BR:bbae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FRD01_20605 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B MACPF_1 KH_2 PAP_PilO KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: QED29593
UniProt: A0A5B8XZT4
LinkDB
Position
5022566..5024281
AA seq 571 aa
MEDSMQTLTVAYSLLALVLGVVIGWLLYKSRSIRELQDMVDERVAQLRARTIEETKSEIQ
RTLTSDLEDKVREELKEKLKADVEEEVQRTARKLESDAETKAQERIRAAEKEAKELLSAA
KKEMQEETASRRQELEKSEARLTQRASSLDAREEKLEKRTQELATKDAELMGTSRKLKDR
EAEIEAKSAGIQAELERVAGLSADAARTELVESLTGEAKLEAAKVARQYEEEAIEEADRR
AKKVIATSVQRWAGEYVAERAVTVVPIPNDEIKGRIIGREGRNIRALEAATGIDIIIDDT
PEAVMVSGFDPVRRQVARISLEKLISDGRIHPSRIEEVVEKTSAEVESQIKEYGERAAFE
LGIHNLHIDLIKLVGRLQFRTSYGQNMWSHSIEVGFLCGMMAAELGLNVKHARRAGLLHD
IGKALTHENDGPHALVGAEIAKRCGEHEVVRNAIAAHHNEEPQNSAIAHLVIAADALSGA
RPGARREVLGTYIKRLEDLERISQEFEGVEKAFAVQAGREIRVMVENSRVTDDQAFVLSK
EIAAKIESELTYPGQIKVCVIRETRSVDYAR
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggaagattcaatgcaaacgctcacagtggcgtattcgctgctggcgctggttttgggc
gttgttattggctggcttttgtacaagagccggtccattcgagaactacaagatatggtc
gatgagcgcgtggcacaacttcgagcccgtaccatcgaagagaccaaaagtgagatacag
cgaaccctgacgagcgacctcgaggacaaagtccgtgaggagctgaaagagaaacttaag
gcggacgtcgaagaagaggttcagagaaccgcgaggaagctagagtcggatgccgagacc
aaggctcaagagcgcatccgtgctgcggagaaggaggccaaagagcttctgagcgccgcc
aagaaagagatgcaggaggagacagctagtcgcaggcaagagctcgagaagtccgaggcg
cgtcttacgcagcgcgcatctagtctggatgcccgtgaagagaagcttgagaagcgcacg
caggaattggccactaaggacgctgagttgatgggaacttcccgcaaactcaaggaccgt
gaggctgagattgaggcgaagagtgctgggattcaggctgagcttgagcgagtggcaggt
cttagtgccgatgccgcgcgtaccgaactcgtggagtcgttgactggtgaggctaagctc
gaagcggctaaagttgctcggcagtacgaggaagaggcgattgaggaggccgaccgacgc
gccaagaaagtcatcgcgacctcggtgcagcgctgggccggcgagtatgtggctgagcgc
gccgtgaccgtcgtcccgattccgaacgacgaaatcaaagggcggattatcggccgtgag
ggccgcaatatccgcgctttggaggccgcaaccgggatcgacatcatcatcgatgacacc
cctgaggcggtgatggtgagcggctttgaccctgtaaggcgtcaggtcgctcgtatctcg
cttgagaagttgatttccgacggtcgtattcacccttcgcgtattgaagaagtggttgag
aagaccagcgccgaagtggagtcgcaaatcaaagaatacggcgagcgtgctgcgtttgag
ctgggaatccacaatctacatatcgacttgattaagctggttggtcgccttcaattccga
accagctatggtcagaatatgtggtcacacagcatcgaggtcggattcctctgtggcatg
atggcggctgagctcggtctcaacgtcaagcatgcccgccgagctggccttcttcacgat
atcggcaaggccttgactcacgaaaatgacgggccacacgcccttgttggcgctgagatt
gccaagcgttgcggcgagcacgaggtggtccgaaatgccatcgcggcgcaccacaacgaa
gagcctcagaactcagccattgcgcacctcgtgattgctgcagacgcactctcaggcgca
cgtcctggcgcgcgccgcgaagttctcggaacgtacatcaagcgacttgaggacctcgag
agaatttctcaagagttcgaaggtgtggagaaggcgtttgccgttcaagcaggccgcgag
attcgcgtcatggtcgagaactcaagggttacggacgaccaagcctttgtgctcagcaaa
gagattgctgccaagatcgagagcgagctcacctatccgggccaaatcaaggtctgtgtg
attcgcgagacgcgctcggtggactacgcccgctag

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