Microvenator marinus: FRD01_20605
Help
Entry
FRD01_20605 CDS
T08125
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bbae
Microvenator marinus
Pathway
bbae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRD01_20605 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbae03019
]
FRD01_20605 (rny)
Messenger RNA biogenesis [BR:
bbae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRD01_20605 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
MACPF_1
KH_2
PAP_PilO
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QED29593
UniProt:
A0A5B8XZT4
LinkDB
All DBs
Position
5022566..5024281
Genome browser
AA seq
571 aa
AA seq
DB search
MEDSMQTLTVAYSLLALVLGVVIGWLLYKSRSIRELQDMVDERVAQLRARTIEETKSEIQ
RTLTSDLEDKVREELKEKLKADVEEEVQRTARKLESDAETKAQERIRAAEKEAKELLSAA
KKEMQEETASRRQELEKSEARLTQRASSLDAREEKLEKRTQELATKDAELMGTSRKLKDR
EAEIEAKSAGIQAELERVAGLSADAARTELVESLTGEAKLEAAKVARQYEEEAIEEADRR
AKKVIATSVQRWAGEYVAERAVTVVPIPNDEIKGRIIGREGRNIRALEAATGIDIIIDDT
PEAVMVSGFDPVRRQVARISLEKLISDGRIHPSRIEEVVEKTSAEVESQIKEYGERAAFE
LGIHNLHIDLIKLVGRLQFRTSYGQNMWSHSIEVGFLCGMMAAELGLNVKHARRAGLLHD
IGKALTHENDGPHALVGAEIAKRCGEHEVVRNAIAAHHNEEPQNSAIAHLVIAADALSGA
RPGARREVLGTYIKRLEDLERISQEFEGVEKAFAVQAGREIRVMVENSRVTDDQAFVLSK
EIAAKIESELTYPGQIKVCVIRETRSVDYAR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcaatgcaaacgctcacagtggcgtattcgctgctggcgctggttttgggc
gttgttattggctggcttttgtacaagagccggtccattcgagaactacaagatatggtc
gatgagcgcgtggcacaacttcgagcccgtaccatcgaagagaccaaaagtgagatacag
cgaaccctgacgagcgacctcgaggacaaagtccgtgaggagctgaaagagaaacttaag
gcggacgtcgaagaagaggttcagagaaccgcgaggaagctagagtcggatgccgagacc
aaggctcaagagcgcatccgtgctgcggagaaggaggccaaagagcttctgagcgccgcc
aagaaagagatgcaggaggagacagctagtcgcaggcaagagctcgagaagtccgaggcg
cgtcttacgcagcgcgcatctagtctggatgcccgtgaagagaagcttgagaagcgcacg
caggaattggccactaaggacgctgagttgatgggaacttcccgcaaactcaaggaccgt
gaggctgagattgaggcgaagagtgctgggattcaggctgagcttgagcgagtggcaggt
cttagtgccgatgccgcgcgtaccgaactcgtggagtcgttgactggtgaggctaagctc
gaagcggctaaagttgctcggcagtacgaggaagaggcgattgaggaggccgaccgacgc
gccaagaaagtcatcgcgacctcggtgcagcgctgggccggcgagtatgtggctgagcgc
gccgtgaccgtcgtcccgattccgaacgacgaaatcaaagggcggattatcggccgtgag
ggccgcaatatccgcgctttggaggccgcaaccgggatcgacatcatcatcgatgacacc
cctgaggcggtgatggtgagcggctttgaccctgtaaggcgtcaggtcgctcgtatctcg
cttgagaagttgatttccgacggtcgtattcacccttcgcgtattgaagaagtggttgag
aagaccagcgccgaagtggagtcgcaaatcaaagaatacggcgagcgtgctgcgtttgag
ctgggaatccacaatctacatatcgacttgattaagctggttggtcgccttcaattccga
accagctatggtcagaatatgtggtcacacagcatcgaggtcggattcctctgtggcatg
atggcggctgagctcggtctcaacgtcaagcatgcccgccgagctggccttcttcacgat
atcggcaaggccttgactcacgaaaatgacgggccacacgcccttgttggcgctgagatt
gccaagcgttgcggcgagcacgaggtggtccgaaatgccatcgcggcgcaccacaacgaa
gagcctcagaactcagccattgcgcacctcgtgattgctgcagacgcactctcaggcgca
cgtcctggcgcgcgccgcgaagttctcggaacgtacatcaagcgacttgaggacctcgag
agaatttctcaagagttcgaaggtgtggagaaggcgtttgccgttcaagcaggccgcgag
attcgcgtcatggtcgagaactcaagggttacggacgaccaagcctttgtgctcagcaaa
gagattgctgccaagatcgagagcgagctcacctatccgggccaaatcaaggtctgtgtg
attcgcgagacgcgctcggtggactacgcccgctag
DBGET
integrated database retrieval system