Microvenator marinus: FRD01_22785
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Entry
FRD01_22785 CDS
T08125
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bbae
Microvenator marinus
Pathway
bbae00040
Pentose and glucuronate interconversions
bbae01100
Metabolic pathways
bbae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FRD01_22785
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRD01_22785
Enzymes [BR:
bbae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FRD01_22785
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QED30007
UniProt:
A0A5B8XXU0
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Position
5542472..5543647
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AA seq
391 aa
AA seq
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MRSSLHFGSICLVLILGFLSSCGSSSTSDPEDLGGIEDMGGVEDLRSADMSADLDLVNNL
VDSGAADDSGPDLVTMPDMTQRPPHEQLLSELVGFGQETTGGAGGPVVTVTTLADSGAGS
LREAATSQGPAWIRFLVSGVIELESAIEVLSDKTIDGRGADITITGEGLFVQNGEGNVII
NNIKIRDTSNDMIRFFNGGSNMWVHKCDLSNGGDGAFDATEGVTGVTVSYTHIFDHDKAM
LVGAGSDDGDGVNMRWTAHHNWYENVVQRLPAIRFGQAHSFNNLIEWRSGTAMSTRLSPS
QILVENNILAPQTNVGHKVISLAEDRGAAKFVGNLERPLPGDTIEFEETNPESVFDPSTS
YSYTAEPANGDLDAYIRANAGWQDVPFPEVP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcttcgcttcattttggttcgatttgtctggtcttgattctgggatttctttca
agttgcgggtcgtccagcacatcggaccccgaggacctcggaggcatagaggacatggga
ggcgtcgaagatttgcgttcggcagacatgagtgccgaccttgatctcgtcaacaatctc
gtagattcaggtgctgctgacgattcggggcctgacctcgtcacgatgccggacatgact
caaaggccaccacacgaacaactcttgagtgagttggtagggttcggtcaggagaccacg
ggcggtgcaggtggcccggttgtgactgtgacaactcttgcggattcgggagccggttct
cttcgcgaagccgctaccagccaaggccctgcttggatcaggttcctcgtaagtggcgtt
attgagttggagtctgcgatcgaagtcttgagcgacaagaccatcgacgggcgaggggcg
gacattacgatcaccggagaggggctttttgttcagaacggtgagggcaatgtcatcatc
aacaacatcaagattcgcgatacttcgaatgatatgattcgattctttaacggcggctca
aatatgtgggttcacaaatgtgacctctcgaatggcggagatggcgcatttgatgccacc
gaaggggttactggcgtcaccgtctcctacacacatatcttcgaccatgacaaagcgatg
cttgtgggggccggctcggacgatggagacggcgtaaacatgcgttggaccgcacaccac
aactggtacgaaaatgtcgtacagcggctgccagctattcgtttcggtcaggcccatagc
ttcaacaatttgatcgaatggcgaagtggtacagcaatgtcgacgcgcctgagtcccagc
caaatcttagtggagaacaatatcctcgcgcctcaaaccaacgtcgggcacaaagtaatc
tcccttgctgaggaccgtggcgcagcaaaatttgttggaaacttggagcgtccactgcct
ggcgacacgattgagttcgaagagaccaaccctgaatctgttttcgatccctcgacttcc
tactcttacacagctgagcccgctaatggggacctcgacgcgtacatccgtgcgaacgct
gggtggcaggacgttccttttcctgaagtgccctag
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