Burkholderiales bacterium GJ-E10: E1O_00090
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Entry
E1O_00090 CDS
T03654
Name
(GenBank) putative uncharacterized protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bbag
Burkholderiales bacterium GJ-E10
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbag03016
]
E1O_00090
Enzymes [BR:
bbag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E1O_00090
Transfer RNA biogenesis [BR:
bbag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E1O_00090
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
Phage-scaffold
HTH_upst_double_PIN
Motif
Other DBs
NCBI-ProteinID:
BAP87140
UniProt:
A0A0A1H1M0
LinkDB
All DBs
Position
9213..11183
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AA seq
656 aa
AA seq
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MTTSHVVFEESGELKAGTVRAATDSSLQVDTTTGKRVKVKANAVLLRFDRPAADELLRSA
RAEAEGIDVDFLWECAPQEEFGFERLARDYYGHDPAAVEAAAVLMRLHAAPMYFYRKGRG
VFRPAPPETLRAALAAVERRRQQELRREQMIEQLRRGELPEEIAASAMNLLCRPDRNGIE
YKALEEAAHVLQMSPLRLLLARGAIASPYQWHVQSFLARTFPGGTGFSADLPAPSMRFED
LPQSPVPAFSIDDSSTTEIDDAFSVRRTEAGWRIGIHIAAPALEIARDHPLDVVARARMS
TVYAPGMKITMLPEAWVDAYSLAEGRTVPALSLYLDVDPETYAITAANTVVDRITVAANL
RHDHPELAWDEAQVAAGDVPGPFGADLALLWQLASRLKAGREAVRGRPEPKGREEVSIQL
DGEGEAARVRLQTRRRDAPLDRIVAELMIVANSQWGAWLEQLRWVGVYRSQSLGRVRMST
SPAPHEGLGVARYAWCTSPLRRYVDMLNQRQLVAAALGRAAPYGRGDSDLFSAVSAFDAA
YGAYADFQERMERYWSLRWLQQEGVHRIEARVAREEVLRVQGLPLTLKLAAAAQYGRGQR
LALEVGAIDFVELVPELRVVQVLAEEPAQAAAEEEEVVEEEVVEAQRVPPAADAPS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacctctcacgtagtcttcgaggaaagcggcgaactgaaggccggtacggtgcgc
gcggcgaccgactcctcgctccaggtcgacacgaccaccggcaagcgcgtgaaggtcaag
gcaaatgccgtgctgctgcgcttcgaccgcccggcggcggacgaactgctgcggtccgcg
cgcgcggaagccgaaggcatcgacgtcgattttctctgggagtgcgcgccgcaggaagag
ttcggcttcgagcgtctcgcgcgggactattacggccatgatccggcggcggtggaagcg
gcggcggtcctgatgcgcctgcatgccgcaccgatgtatttctatcggaaggggcgcggc
gtcttccggccagcgccgcccgaaaccctgcgcgcggcgctggcggcggtggagcgccga
cgccagcaggaactgcgacgggagcagatgatcgagcagttgcgccgcggggaactgccc
gaggaaatcgccgcctcggcgatgaaccttctgtgccgcccggaccgcaacggcatcgag
tacaaggcgctcgaggaggcggcccacgttctgcagatgagcccgctgcgcctgctgctg
gcgcgcggcgccatcgcttcgccataccagtggcatgtgcagtcgttcctggcgcggaca
ttccccggcggcacggggttctccgccgacctgccggcgccgtcgatgcggttcgaggat
cttccgcaatcgccggtgccggcgttttcgatcgacgacagttccaccaccgagatcgac
gacgcgttctcggtccggcgtaccgaggcggggtggcgcatcggcatccacatcgccgcg
cccgcgctggagattgcgcgcgaccatccgctcgacgtggttgcgcgcgcccggatgtcc
acggtgtatgccccggggatgaagatcaccatgctgcccgaggcgtgggtcgatgcatac
tctctcgcggagggtcggaccgtgccggcgctttcgctctacctcgacgtcgatcccgag
acctatgcgatcacggcggcgaacacggtcgtcgatcggatcaccgtggcggccaatctg
cgccacgaccatccggagctggcgtgggacgaggcgcaggtggccgcgggggatgtgccg
gggcctttcggcgccgatctggcgctgctgtggcaactcgccagccgcttgaaggccgga
cgggaggcggtccgcggccggccggagccgaaagggcgcgaggaggtatcgatccagctc
gatggcgagggcgaggccgcgcgcgtgcgcttgcagacccggcgccgggatgcgccgctg
gatcggatcgttgccgaactgatgatcgtcgccaattcgcaatggggcgcttggctggag
cagcttcgttgggtcggggtataccgttcgcagtcgctgggccgcgtgcggatgtccacg
agcccggcgccccacgaagggctcggcgtggcgcggtacgcgtggtgtacgtcgccgctg
cggcgctatgtcgacatgctcaaccagcggcagctggtcgctgcagccctcgggcgtgcg
gcgccctatgggcgcggcgattccgatctgttttccgccgtgtccgcgttcgatgccgcg
tatggcgcatacgcagatttccaggagcggatggagcgctactggagcctgcgctggttg
cagcaggaaggcgtccatcgcatcgaagcccgcgtggcgcgcgaagaggtgctgcgggtg
caggggctgccgctcacgctgaagctcgccgcggcggcccagtacgggcgcgggcagcgc
ctggcgctcgaggtcggggcgatcgacttcgtcgaactggtgcccgagctgcgggtcgtg
caggtgctggcggaagagccggcacaagccgctgccgaggaagaggaggtcgtcgaagag
gaagtcgtcgaggcgcagcgcgttccgcccgcggcggacgcgccgtcgtag
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