Burkholderiales bacterium GJ-E10: E1O_01340
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Entry
E1O_01340 CDS
T03654
Name
(GenBank) dNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbag
Burkholderiales bacterium GJ-E10
Pathway
bbag03030
DNA replication
bbag03430
Mismatch repair
bbag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E1O_01340
03430 Mismatch repair
E1O_01340
03440 Homologous recombination
E1O_01340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbag03032
]
E1O_01340
03400 DNA repair and recombination proteins [BR:
bbag03400
]
E1O_01340
Enzymes [BR:
bbag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E1O_01340
DNA replication proteins [BR:
bbag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E1O_01340
DNA repair and recombination proteins [BR:
bbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E1O_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BAP87265
LinkDB
All DBs
Position
141309..142025
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AA seq
238 aa
AA seq
DB search
MRQIVLDTETTGLEAKDGHRIIEIGAIEIFGRQVIPERQVHHYVNPDREVDAGARNVHGL
DSEFLADKPRFAEIVDELLEFVRGAEVLIHNAPFDVSFLDAELARLNRPPFAQHCEKVTD
TLRMAREAHPGKRNSLDALCERYGISNRHRTLHGALVDAALLADVYLAMTRGQDSLVMDL
APAAQQADLGPVDAGRLIVLRADAGEIAAHESVLDSIEKDAKGGCVWRRSAVDPAAVG
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagatcgtgctcgacacggaaaccaccggcctggaggcgaaggacggccatcgc
atcatcgaaatcggggcgatcgagatattcggccgccaggtgataccggagcggcaggtg
catcactatgtcaacccggaccgggaagtcgatgccggcgcacgcaacgtccacggactg
gacagcgagtttcttgcggacaagccgcggtttgcggagatcgtcgacgaattgctggag
ttcgtgcggggtgcggaggtgctgatccacaacgcgcccttcgacgtttcctttctcgac
gccgaactcgcgcggctgaaccggcctccgttcgcgcagcattgcgaaaaagtcaccgat
accttgcgcatggcgcgggaggcgcatccgggcaagcgcaattccctcgatgccttgtgc
gagcgctatggcatttccaatcgccatcgcaccctgcacggcgccctggtcgatgcggcg
ctgctcgccgacgtctatctggcgatgacccgcggtcaggacagcctggtcatggacctg
gcgcccgcggcgcagcaggccgatctcggcccggtggacgccggccgcctgatcgtcctg
cgcgccgatgccggggagatcgccgcgcatgagtcggtcctcgattcgatcgaaaaggac
gccaagggcggctgcgtgtggcgccgcagcgccgtggacccggccgccgtcgggtag
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