Burkholderiales bacterium GJ-E10: E1O_03300
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Entry
E1O_03300 CDS
T03654
Name
(GenBank) uracil DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbag
Burkholderiales bacterium GJ-E10
Pathway
bbag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E1O_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbag03400
]
E1O_03300
Enzymes [BR:
bbag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E1O_03300
DNA repair and recombination proteins [BR:
bbag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E1O_03300
Prokaryotic type
E1O_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAP87461
UniProt:
A0A0A1GZM8
LinkDB
All DBs
Position
349871..350608
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AA seq
245 aa
AA seq
DB search
MLSRTPMHSNPCLRAPARAHFDALPAAWRTRLRDALADEASHRLVSFLDARIAAGARVYP
PRPFAALEGCDPGDVRVVILGQDPYHGPGQAHGLAFSVPDGVRPPPSLRNMFRELQRDGI
CAQIPSTGNLASWAGQGVLLWNAVLTVEEGQANSHAGKGWEAITDAVLDAVARDPAPKVF
LLWGAHAQARRGRIEAAAGGRHCILTANHPSPLSARRPPVPFLGCGHFSRANEFLVAQGR
APVAW
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgctttcccgtacgccgatgcattccaatccatgcctccgcgctcccgcccgagcgcat
ttcgacgccctccctgcggcttggcgcacgcgactgcgcgatgcgctcgccgacgaggcg
tctcatcgccttgtctcgtttctcgacgcgcggatcgccgccggagcgcgagtctatccg
ccgcgcccctttgccgcgctggaggggtgcgatcccggtgacgtccgggtcgtgatcctc
ggccaggatccctaccacggccccggccaagcccatgggctggcgttttccgtccccgac
ggcgtgcggccgccgcccagcctgcgcaacatgttccgcgaactccagcgcgacgggatc
tgcgcgcagatcccgtccacgggcaacctcgcttcctgggcgggccaaggcgtgctgttg
tggaacgcggtgctgacggtggaggaggggcaggccaacagtcatgccggcaagggatgg
gaggcgattacggacgcggtccttgacgccgtggcgcgcgacccggcccccaaggttttc
ttgctctggggggcgcacgcgcaggcgcgccgcggccggatcgaggcggcggccggcggg
cggcactgcatcctcaccgccaaccacccgtcgccgctctccgcacggcgtccgccggtg
cccttcctgggttgcgggcacttttcccgagcaaacgagttcctggttgcgcaggggcgg
gcaccggtggcgtggtga
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