Burkholderiales bacterium GJ-E10: E1O_04690
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Entry
E1O_04690 CDS
T03654
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbag
Burkholderiales bacterium GJ-E10
Pathway
bbag03420
Nucleotide excision repair
bbag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E1O_04690
03430 Mismatch repair
E1O_04690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbag03400
]
E1O_04690
Enzymes [BR:
bbag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E1O_04690
DNA repair and recombination proteins [BR:
bbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E1O_04690
MMR (mismatch excision repair)
Other MMR factors
E1O_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAP87600
UniProt:
A0A0A1H2W9
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All DBs
Position
511014..513416
Genome browser
AA seq
800 aa
AA seq
DB search
MNLVDDLNPQQRAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQSGRTTPAGILAVTFT
NKAAREMQTRLEAMLPVNPRGMWIGTFHGLCNRLLRAHHRDANLPETFQILDTQDQLSAI
KRLIKAANVDEERCPPRDLQYFINSAKESGRRASDLGGAGTDRRWVELYAAYDAQCQREG
CVDFAELLLRSVELLTRHEAIREHYRSRFRHILVDEFQDTNTLQYRWLKLLAGLGGSEGG
PTGVPIFAVGDDDQSIYRFRGANVGNMSDFQREYAVRHLIKLEQNYRSHGNILDAANHLI
GNNARRLGKKLWTDAGAGEKIHLFEAGSDGQEAAWIVDEVRDLQGRGARLQDVAILYRSN
AQSRVIEHALFNAGMAYRVYGGMRFFERAEVKHALAYLRLAANPDDDISFARVVNFPPRG
IGARSLEQLQDAARQAGTSLFRAIGTLGGRAGANFAQFAAIVGVLQEAAGRVTLAELVAE
ALQRSGLNEHYRNERDGADRLENLAELINAATGFSAEQARDLAREIGLDPGLDAGRNPGS
TAADSAGDEADPRSTLIAFLAHASLEAGDNQASAGQDALQLMTVHAAKGLEFDSVFLTGL
EEGLFPHENSLSEADGLEEERRLMYVAVTRARKRLSLSYAQSRMLHGQTRYGLRSRFVDE
LPEALLQIRTPRRGTFFGAGMQDRAPWGRETSQARPAGAVRGRGEIAGGRSAPFARPMGE
AAGMSGNGMPPRSPLQAGGAATAAAESHGLRVGQGVRHAKFGEGIVVRLQGNGTDARAQI
NFRSVGVKELLLSVAKLQPA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgtcgacgatctcaatccccagcagcgcgccgccgtcaccctgcccgacgaa
ccggcgctcatcctcgccggcgcgggcagcggcaagacccgcgtgctcacgacccgcatc
gcctggctgatccagtccgggcgcacgacgccggccgggatccttgccgtcaccttcacg
aacaaggcggcgcgcgagatgcagacccggctcgaggcgatgctgccggtcaatccccgg
gggatgtggatcggaaccttccacggcctttgcaaccgtctgctgcgcgcccaccatcgc
gacgccaacctgcccgagacctttcagattctcgacacgcaggaccagctgtcggcgatc
aagcggctgatcaaggcggccaacgtcgacgaggagcgctgcccgccgcgcgacctgcag
tacttcatcaactcggccaaggaatcgggccggcgcgcctcggacctcggcggagcggga
accgatcgccgctgggtggagctctatgccgcctacgacgcgcagtgccagcgcgagggt
tgcgtcgacttcgcggagctgttgctgcggagcgtggaactcctgacgcggcacgaagcg
atccgggaacactaccgcagccgttttcgccacatcctggtcgacgagttccaggacacc
aatacgctgcaataccgctggctcaagcttctcgcggggctgggcggatccgagggcggg
ccgacgggtgtgccaatcttcgcggtcggcgacgacgatcagtcgatctaccgcttccgc
ggcgccaacgtcggcaacatgtcggatttccagcgcgaatacgcggtccggcatctcatc
aagctcgagcagaactaccgctcgcacggcaacattctcgacgccgccaaccacctcatc
ggcaacaatgcgcggcgcctcggcaagaagctctggacggacgcgggggcgggggagaag
atccatcttttcgaagccggttcggatggccaggaggcggcgtggatcgtcgacgaggtg
cgcgacctgcaggggcggggcgcccggctgcaggacgtcgccattctctaccgctccaat
gcgcagtcgcgcgtgatcgagcatgcgctgttcaatgccggcatggcgtaccgggtatac
ggcggcatgcgcttcttcgagcgcgccgaagtcaagcacgccctggcctatctgcggctg
gcggccaatcccgacgacgacatttccttcgcgcgagtggtgaactttccgccgcgcggc
atcggggcgcgcagcctggagcaattgcaggacgcagcgcggcaggcggggaccagcctg
ttccgtgcgatcgggaccctgggcggccgggcgggagccaatttcgcgcagttcgccgcg
atcgtcggcgtgctgcaggaggcggccgggcgggtgacgctggccgaactggtggccgag
gcgctgcagcgcagcggcctcaacgagcactaccgcaatgaacgggacggcgccgaccgg
ctggaaaacctggcggaactgatcaatgccgccaccggattttccgccgagcaggcgcgc
gacctggcacgcgagatcgggcttgatcctgggctcgacgccgggcggaaccccgggtcg
accgcggccgattccgccggggatgaggccgatccgcggtcgaccttgatcgcgtttctc
gcacacgcgtcgctcgaggccggcgacaatcaggcgagcgcggggcaggacgccctgcag
ctcatgaccgtgcatgccgcgaaagggctggaattcgattcggtgttcctcaccgggctc
gaggaggggctgtttccgcacgagaacagcttgagcgaggccgatggcctggaggaagag
cgccgcttgatgtacgtggcggtcacccgggcgcgcaagcggctcagcctgagctatgcc
cagagccgcatgctgcacggccagacccgctacgggctgcgctcgcgcttcgtcgacgaa
ttgccggaggcgctgctgcagatccgcacgcccagacgcgggacgttcttcggcgcgggg
atgcaggatcgggcgccatggggccgcgagacctcccaggcccgcccggctggcgccgtg
cggggacggggagagatcgccggtggtcgcagcgcaccgttcgcccgcccgatgggggaa
gcggcggggatgagcggaaacgggatgccgccgcggtcgccgctgcaggcgggcggggcc
gcgacggccgccgccgagtcgcatggcctgcgcgtcggccagggcgtgcgccacgccaag
ttcggcgagggcatcgtggtccggctgcagggaaacggcaccgacgcgcgcgcccagatc
aacttccggtcggtcggagtgaaggaattgctgctttcggtcgccaaattgcagccggcc
tga
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